KEGG   Culex quinquefasciatus (southern house mosquito): CpipJ_CPIJ011793
Entry
CpipJ_CPIJ011793  CDS       T01079                                 
Name
(GenBank) conserved hypothetical protein
  KO
K15181  negative elongation factor C/D
Organism
cqu  Culex quinquefasciatus (southern house mosquito)
Pathway
cqu03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:cqu00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    CpipJ_CPIJ011793
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cqu03021]
    CpipJ_CPIJ011793
Transcription machinery [BR:cqu03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    NELF complex
     CpipJ_CPIJ011793
SSDB
Motif
Pfam: TH1 RNase_HII
Other DBs
NCBI-ProteinID: EDS37174
UniProt: B0WYR4
LinkDB
AA seq 602 aa
MAAMDEEYEEDGWINRNNQPVAAGAGVAGIVGGGGGGAEEEADGHDEPLENPQEVLGECL
SKFATNDYIMEPGIFAQLKRYFQAGGTPEQVINQLSANYTAVAQMANLLAEWLILAGVRV
TDVQAMVENHLKDMILKTFDPKKADKIFTEEGETPAWLTEMIEHHTWRSLIYRLAEEYPD
CLMLNFTIKLISDAGFQSEITSISTAAQQIEVFSRVLKTAIAKFLNHPDDGATAIQECAK
MVCHGQHTYVYSQVLIQVLSQEPKGGFIMKRLAQEITKYALKNNHNVTPITMALNSARHP
QACEALTSMLTRNALNPADITVLYRNYSSPEPPPIDLIRNPQFLDLLVDSLFKVGVKINQ
EHKAKYIYLLAYAASVCETPGKKGQPKGHRNTNKDELKPTIQAVEKVHTICNVNRGSTEL
IAEISTLYNCIRFPVVGVGVIRWVENTVTEPSYFKLCTESCPLHLALLDEVACVHSSLHD
QILRLLIQLFESKQDELEILVQLEMKKMLLDRMVNLLARGCVVPVVKYIRQCCTKGDTDI
SLIRYFVTEVLETITHPYSPEFVQLFLPMVENEEITGSMRGEGDNDPVSEFIVHCKAHYT
TI
NT seq 1809 nt   +upstreamnt  +downstreamnt
atggccgccatggacgaggagtacgaggaggacggatggatcaaccggaacaaccagccg
gtggccgccggagctggagtcgctggcatcgttggcggtggtggcggcggcgccgaggag
gaggccgacggtcacgacgagccgctggagaacccgcaggaggtgctgggggaatgtttg
agcaagtttgccacgaatgattacattatggaaccggggattttcgcccagctgaagcgg
tacttccaagcgggaggaacgcccgagcaggtcattaaccagctgtcggcgaattacacg
gccgttgcgcagatggccaacctgctcgcggagtggttgatcctggcgggggtgcgcgtc
acggacgttcaggccatggtcgagaaccatctgaaagacatgatcctgaagacgttcgac
ccgaaaaaggcggacaagatcttcaccgaggagggtgaaacgccagcctggttgacggag
atgattgagcatcatacgtggcggtcactgatttaccgacttgccgaagaatacccggac
tgtttgatgttgaacttcacgatcaagcttatttccgacgccggcttccaaagcgaaatc
acctccatctcgacggcagcccagcaaatcgaagtgttctcgcgcgtgctcaaaacggcc
atcgccaaattcctgaaccacccggacgacggtgcgaccgccatccaggagtgtgccaaa
atggtatgccacggccagcacacttacgtctacagtcaggtcctgatccaagttctgtcc
caggaacccaaaggtggtttcatcatgaaacgcctcgcccaggaaatcaccaagtacgcc
ctcaagaacaaccacaacgtgacgccgatcacgatggccctcaattcggcgcgccatcct
caagcctgcgaagccctcacctcaatgctgacccgcaacgcgctcaacccggcggacatt
accgtgctctatcggaactattcctcgccggaacccccgcccatcgacctcatccgaaac
ccacagtttctggacctgctcgtggactcgctcttcaaggtgggcgtcaaaatcaaccag
gagcataaggcgaagtacatctatctgttggcgtacgcggccagtgtgtgcgagacgccc
ggcaagaagggtcagcccaagggccaccggaacacgaacaaggacgagctcaagccgacg
attcaggccgtcgaaaaggtgcacaccatctgcaacgtgaaccgcggctcgaccgagctg
atcgcggagatctccaccctgtacaactgcatccgcttcccggtggtgggcgtcggcgtc
atccggtgggtcgagaacaccgtcacggagccgtcttactttaagctgtgcaccgagagc
tgcccgctgcacttggcgctgctggacgaggtcgcgtgcgtccactcgtcgctgcacgac
cagatcctgcgcctgctgattcagctgttcgagtccaagcaggacgagctggagattttg
gttcagctggagatgaagaagatgctgctcgatcggatggtgaacctgttggcgcgcggt
tgcgtcgtccccgtggtcaagtacatccggcagtgttgcaccaagggcgacacagacatc
tcgctgattcggtactttgtgacggaagtgctggagacgattacgcatccgtactcgccc
gagtttgtgcagctgtttctgccgatggtggagaacgaggagatcactgggtcgatgcgg
ggtgagggcgacaacgatccggtgtcggagtttattgtgcactgcaaggcgcactacacg
acgatctag

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