KEGG   Culex quinquefasciatus (southern house mosquito): CpipJ_CPIJ012256
Entry
CpipJ_CPIJ012256  CDS       T01079                                 
Name
(GenBank) negative elongation factor B
  KO
K15180  negative elongation factor B
Organism
cqu  Culex quinquefasciatus (southern house mosquito)
Pathway
cqu03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:cqu00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    CpipJ_CPIJ012256
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cqu03021]
    CpipJ_CPIJ012256
Transcription machinery [BR:cqu03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    NELF complex
     CpipJ_CPIJ012256
SSDB
Motif
Pfam: COBRA1 RNA_pol_Rpb1_1
Other DBs
NCBI-ProteinID: EDS37242
UniProt: B0WYZ6
LinkDB
AA seq 590 aa
MSAPPKFPGTGLEEVNVPGQAYLRDALSCCDDPLKAIENFQLENGILLPSLRPMLPLLDL
HGVRRLDFHTSVLEELRDKLIAHINELGAKEGRERDRKLKELLVKSFPVVRVKALRPVVM
CILRNTAHIDDKYLRILVRDRELYQDTDTEVKRQIWRDNQSLFGDEVSPLLSQYIREKEH
ILFDHLNLNNLFFTPTPKVRRQGEVVQKLAHMIGNSVKLYDMVLQFLRTLFLRTRNVHYC
TLRAELLMALHDLEVQDIISVDPCHKFTWCLDACIREKNVDIKRSRELQGFLDNIKRGQE
QVLGDLSMTLCDPYAINFLATSAIKILQHLINNEGLPRENTILILLLRMLALGLSAWIMI
DSQDFKEPKLDSQVVTKFLPALMSLMVDDQVRNLHAKLPPDERESAITTIEHSGPAPDAV
EAYIQESSVASILAMYYTLHTARQKDRVGILRVMAILASCKDDRAYEDPFLHSLIALIIP
MSDEFGNEDFCTGLFDEFLFAGLTRDNVTRHMLKLLWYVHQKLPQRHGRLQTLMKALQPN
AQHHENVHKLYESLQKRVMVAHAQEPVPEPMETDFDSPLKSVPTPGPHYV
NT seq 1773 nt   +upstreamnt  +downstreamnt
atgtcggcgccaccgaaattccccggcaccggcctggaagaggtcaacgttccgggccag
gcgtatctgcgtgacgcattgtcctgctgcgacgatccgctgaaggcgatcgaaaacttc
cagctggagaacgggattctgctgccatcgttgcgtccgatgttgcccctgttggatctg
cacggcgtgcggcggttggatttccataccagcgtgctggaggagctgcgggacaagttg
attgcgcatattaatgagctcggggcgaaagagggtcgcgagagggatcggaagctgaag
gagctgctggtgaagagctttccggtggtgcgcgtgaaggcgttgcggccggtggtgatg
tgcatcctgcggaacacggcgcatattgacgataagtatttgcggattttggtgcgcgat
cgggagctgtaccaggacacggacaccgaggtgaagcggcagatttggcgggataatcag
tcgctgtttggggacgaggtgtcgccgttgttgtcgcagtatattcgggagaaggagcac
attttgtttgatcacttgaatttgaacaatttgttctttacgcctacgccgaaggttcgg
cggcagggagaagtggtgcagaagttggcccacatgatcgggaacagcgtcaagctgtac
gatatggtgttgcagtttttaaggacactgtttttgcgaacgaggaacgttcattattgt
acgctgagggcggaactgctgatggcgttgcacgatttggaagtgcaggacatcatttcg
gtagacccgtgccacaagtttacgtggtgtttggacgcgtgcatccgcgagaagaacgtg
gacatcaagcggtcccgggagttgcagggtttcttggacaacatcaaacgcggccaggag
caggttcttggagatctttcaatgacactgtgtgatccgtacgcgatcaacttcctggcg
acttcggcgattaaaattcttcaacatctcatcaacaacgaaggactgccacgagagaac
acgattctcatcctgctgctgcgaatgttggccctcggactgtccgcgtggatcatgatc
gattcgcaggactttaaagagcccaagctggacagtcaggtggtgaccaagtttctcccc
gcgctgatgtccctcatggtggacgaccaggtgcgcaatttgcacgccaaactgccgccg
gatgagcgcgaaagtgccatcaccaccatcgagcactccggaccggcaccggatgccgtc
gaagcgtacatccaggaaagctcggtcgcctcgatcctcgccatgtactacacactgcac
accgcccgacaaaaggaccgcgtcggcattcttcgcgtgatggccatcctggcttcctgc
aaggacgaccgcgcctacgaagatccgttcctgcactcgctgatcgccctcatcatcccg
atgtcggacgagttcggcaacgaagacttttgcacggggctgtttgacgagtttctgttc
gccgggctcacccgggacaacgtcacgaggcacatgctcaaactgctctggtacgtgcac
cagaagctgccccagcgccacggccggctgcaaacgttgatgaaggcactccagccgaac
gcgcagcaccacgaaaacgtacacaaactgtacgagagtctgcaaaagcgcgtgatggtc
gcccacgcccaggaaccggtcccggagccaatggagacggactttgattcgccgctgaag
agcgtgcccacgcccgggccgcattatgtttag

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