Culex quinquefasciatus (southern house mosquito): CpipJ_CPIJ012311
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Entry
CpipJ_CPIJ012311 CDS
T01079
Name
(GenBank) histone deacetylase
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
cqu
Culex quinquefasciatus (southern house mosquito)
Brite
KEGG Orthology (KO) [BR:
cqu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cqu01009
]
CpipJ_CPIJ012311
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cqu03019
]
CpipJ_CPIJ012311
04131 Membrane trafficking [BR:
cqu04131
]
CpipJ_CPIJ012311
03036 Chromosome and associated proteins [BR:
cqu03036
]
CpipJ_CPIJ012311
Enzymes [BR:
cqu01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
CpipJ_CPIJ012311
Protein phosphatases and associated proteins [BR:
cqu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
CpipJ_CPIJ012311
Messenger RNA biogenesis [BR:
cqu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
CpipJ_CPIJ012311
Membrane trafficking [BR:
cqu04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
CpipJ_CPIJ012311
Chromosome and associated proteins [BR:
cqu03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
CpipJ_CPIJ012311
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
zf-UBP_var
Motif
Other DBs
NCBI-ProteinID:
EDS37000
UniProt:
B0WYC3
LinkDB
All DBs
AA seq
1108 aa
AA seq
DB search
MYKFKKIYAVSSTVVTRQGAQKTKITTRAQRASVEAAETERKAKFYGTRKPNPALAEAKK
RGKLKMSTEPKEGAANPDQNGGVVQLKDIYGSAIAATELVRGPTGLVYDEKFAEHRCLWD
DGYPECPERFTRVLERCRELKLVERCAVIEPRMASEEEVLTKHTPEQLEILKSTRGSQDV
AALEELSSHYDAVFIHPSSYDCSLLSAGSTIELVDAILEGRVQNGMAIIRPPGHHAMKAE
YNGYCFFNNVAIAAQHALDKRGLKRILVVDWDIHHGQGTQRMFYDDPRVLYFSIHRYECG
TFWPNLRESDFDCIGEGAGLGYNFNVPLNRIGMTNGDYLAIWQQLLLPVALEGQMEITPA
FYPHLLSPLMSLAQGKVAVVLEGGYCLTSLAEGGALTLRALLGDPCPLLVEKLQPPCESM
QQTILNCVHSHRPYWKNLQLNATYGLEELNNVNPQPNFHQVIQYYVQQEPKPEPVRYETR
NCYPVQASEEKNRIEERLAMLQIATRLTFPATRVCYVYDDLLLEHRNLHEDLHPEQPQRI
ARIFSRHEEYKLLPRMKRLKPRHATTDELCLVHSRQHVNVIRRTVEREEMKQVADKFNSV
YFHPKTFECATLATGSVLQVVDEVLNGQSRSGVCIVRPPGHHAESDMPHGFCIFNNVAIA
AQYAIRDHGLKRVLIVDWDVHHGNGTQHIFESNPKVLYMSVHRYDNATFFPKSKDANYDS
VGNGTGEGFNVNIPWNKKGMGDQEYAAAFQQVILPIAYEFDPELVLVSAGFDAAIGDPLG
GCKVTPEAYGHFTHWLSSLANGRVIVCLEGGYNVNSISYAMTLCTKSLLGDPLPMLHVSQ
RYNGPNAACVESIRNVLSVQEKFWKSLKFNKKLPDFRSATGEADLNSAFGKLQLSAGTSG
SSTDSSPAKNSSDDSGVPFDGDDQPGPSRRRNKQTTDGQQSASGSSGAGEGSSNSGTKQE
TLQDFLAANLEALQNEEMFAVIPLRDCPHLKELNPDNIPDKISTNAPCTGCESSVENWVC
LLCFNVCCGRYINEHAIEHATVTEHPLALSFSDLSVWCYKCESYVDNPVLYPYKNLVHQD
KFGGEQLVWSYGSDLVLDVKPPTTKTKE
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
atgtataaattcaagaagatttatgctgtgagttccaccgtcgtgactcgacagggcgcc
caaaagaccaaaatcacaacccgagcccagcgtgcgtcggtcgaagcggcggaaaccgaa
cgaaaggccaaattctacggaaccagaaagcccaacccagcgctcgcggaagcgaaaaag
cgaggcaagctgaaaatgtccacggaaccgaaggaaggggcggccaatccggaccagaac
ggtggcgttgtccagctgaaggacatttacggcagcgcgatcgccgcgacggaactggtc
cgcgggccgaccgggctggtctacgacgagaagtttgccgagcatcggtgcctgtgggac
gacggatatccggagtgtccggagcggttcacccgggtgctggaacggtgccgggaactc
aagctggtcgagcgatgtgccgtgattgaacctcggatggccagcgaggaggaggtgttg
acgaagcatacgcccgagcagttggagattctcaagagtacacggggctcgcaggatgtg
gccgcactggaggaactaagttcgcattacgacgcggtctttatccatccgtcatcctac
gattgttcgctactatcagcgggtagtacgatcgagctggtcgatgcaattttggagggg
cgtgtgcagaacggaatggccatcatccggccgccgggtcaccacgccatgaaggccgag
tacaatgggtactgcttcttcaacaacgtggcaattgcggcgcagcatgcgctcgataag
cgtggactgaagcggatcctggttgtcgactgggacatccaccacggacagggaacgcag
cggatgttttacgatgatccgagagtcctgtatttttcgatccatcgctacgagtgcgga
acgttctggccaaacctgcgcgagtccgactttgactgcatcggcgaaggcgctggactg
ggctacaactttaacgtcccgctcaaccgaatcggaatgaccaacggagactatctggcc
atttggcagcaactattgctaccggtggcactggagggccaaatggagattacgccggcg
ttttaccctcacctcctttcaccactgatgtccctagcgcaaggcaaggtcgccgtagtc
ctggaaggtggctattgcttgacgtctctcgccgaaggaggcgcgttaacgttgcgtgcc
ctgctgggagatccgtgtccgctgctggtcgagaagcttcagccgccgtgcgaaagcatg
cagcagactattctgaactgcgtccattcgcatcgaccgtactggaagaatttgcagctg
aacgcgacgtacggattggaagagttgaacaacgttaatccgcagccaaactttcaccaa
gttattcagtattacgtccagcaggagccaaagccggaaccggttcgatatgaaacgaga
aattgttatcccgtccaggctagtgaagagaagaatcggatcgaggagaggctagctatg
ctgcagattgcaaccaggttgaccttcccggcgacccgggtttgctacgtgtacgacgat
ctgctgctcgagcatcgcaatctgcacgaggatcttcatccggagcaaccgcaacgaata
gccagaatcttttcgcgccacgaagagtacaaactgttaccacgaatgaagcgacttaag
ccacgtcacgcgaccactgacgaactgtgtctggtgcactcgcgccagcacgtgaacgtg
attcggaggacggtcgagcgggaagagatgaagcaagtggcggacaagttcaactccgtg
tacttccatccgaagacgttcgagtgcgccacgctggcgaccggatcggtgctacaggtc
gttgacgaagtgctgaacgggcagtcccgtagcggtgtgtgcattgtacgaccgccgggg
caccacgccgagtcggatatgccgcacggattttgcatctttaacaacgtggccattgcg
gcgcagtacgcaatccgcgatcacgggctgaagcgagtgttgatcgttgattgggacgtg
caccacggtaacggaacgcaacacatctttgagagcaacccgaaggtcctttacatgtca
gtccatcggtacgacaacgcgaccttcttcccaaagagcaaggatgcgaattacgactcc
gtgggaaatggcaccggtgaaggcttcaacgttaacattccatggaacaagaagggcatg
ggagatcaagaatatgccgcagccttccaacaagtcatcctaccgatcgcgtacgagttc
gatccggaactggtcctagtttcagctggttttgatgccgccattggtgatccactcggc
ggttgcaaggtcacgccggaagcatacggacacttcacccactggctttcctcgctggcc
aacggtcgtgtgatcgtgtgcctcgagggaggttacaacgtaaactcaatctcctacgcg
atgaccctctgtacaaagtccctcctgggtgatccactcccgatgctacacgtcagtcaa
cgctacaatggaccaaacgctgcctgcgtcgaatcgatccgaaatgtgctgtcggtgcag
gaaaaattctggaagtcgctcaaattcaacaaaaaactacccgactttcgcagtgccaca
ggcgaagccgacctgaacagcgccttcggtaagctgcaactttctgcgggaacctctgga
tcttcgacggactcgtccccagcgaagaactcgagcgacgattcgggcgttccgttcgat
ggtgacgatcaacccggaccaagccgaagacggaacaagcaaaccactgacggtcaacag
agcgcatccggtagcagtggagccggtgaaggatcttccaactcgggaacgaagcaagaa
acgttgcaggatttcctagctgcaaacttagaggccttacaaaacgaggaaatgtttgcc
gtcatcccgttacgagactgcccccaccttaaggaactcaaccccgacaacatccccgat
aaaattagtacaaacgctccgtgcaccggctgcgagtcctccgtggaaaactgggtctgc
ctgctgtgcttcaacgtgtgctgcggtcgctacatcaacgaacacgcaatcgaacatgcc
acggtcacggaacatccgctcgcgctaagcttcagcgatctgtccgtgtggtgttacaag
tgcgagtcctacgtcgacaacccggtcctgtacccgtacaagaatctcgtgcaccaggac
aagtttggcggcgaacagctagtttggtcgtacgggagtgatctcgtcctcgatgtgaaa
ccgccaacgaccaaaacgaaagaatga
DBGET
integrated database retrieval system
