Culex quinquefasciatus (southern house mosquito): CpipJ_CPIJ014211
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Entry
CpipJ_CPIJ014211 CDS
T01079
Name
(GenBank) DEAD box ATP-dependent RNA helicase
KO
K13131
ATP-dependent RNA helicase DDX20 [EC:
5.6.2.7
]
Organism
cqu
Culex quinquefasciatus (southern house mosquito)
Brite
KEGG Orthology (KO) [BR:
cqu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cqu03041
]
CpipJ_CPIJ014211
Enzymes [BR:
cqu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CpipJ_CPIJ014211
Spliceosome [BR:
cqu03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
CpipJ_CPIJ014211
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Motif
Other DBs
NCBI-ProteinID:
EDS40148
UniProt:
B0X471
LinkDB
All DBs
AA seq
1049 aa
AA seq
DB search
MAGHNLQDERVRTEDVEFDRSLRFEQMFLSEAVVRGLSRNNFVMPSPIQARAIPLGKLGL
DLLVQAKSGTGKTLVFSVLILEGHNPDVPFPQSLVVVPTREIAVQIEQVLNRIAYSMANF
RAKSFIGGLDIVQDRKNLQNCTAVVGTPGRIWHLIKSGVLNMSHIKMLVLDEADSLIAGT
LQSDVDQIIKAVPKKRQTLVCSATFYKNRDRELLKYMKEQFIGVTPKKEVPVLHGIRQFV
RELPEAKDNIKEMMAKIHELDSIFKKLPFSQCLLFTNSQTKAESYSSQLTRIGWPTEVIR
GGQEQRVRLKTVENLKQFRCRILSATDVIARGIDAENVNLVINVDVPVDNMVYLHRIGRG
GRFGTQSLAITLTAKAKDTERFRKILFDIGGNEMFVYQLPKEELEELWNFNEYGERYPKF
YASKLEQEIRDSGLAPIAEVDSRTELDRASAETLTDSLDLPAKTSSGAFEVDSIEKLQSP
KKEETAAEDEQDGEELVERIIPLDEQVEEVGERQQETLSVCDEDLKRIVKPSATADALFL
AAMEKLELDEDEEQPETSKVDSPEVAEKDESSPKAAAAAVDEVDKLFLAAMEKFDEDDQL
EEVKPALEQQVNGIESEVVNEMFLAAMEKVDQDETANGSDEQQQQDAVADKLFLAAMDKL
GFGDSDDKPVDLSKKKEHSPAVMDKFDSDGDSLDAASGRRDSTSSCSTPKSPCSSDSSFS
SNATKKVEVGSNFTTPNSRVQEIRGAGPAHQISSSTSDNSELSQLSESGGAGGVCVPAES
NCLPLEVNNDALFAKIMEQKELEAEHHLQRPFQFSIDGCSLEVHDDPISDRDINSRKGSV
PDVVPSGITLDPSRLQNRPPSALAAAIEQDELATFDLNSNHGSVFEHDEGEEAVVPQENR
PKRIRFQDGSVSNGSGGDSLSMKSNSNRAQGEPDPDPLALPPIVDATVDGTEANEDASSY
SSEYDSESSNSSFFDQRDEHWEATAAAASSAAVQTDEHSLKVPTKRPKVSKRATGAYHRT
YATWSNQYWNQMTMIRDYARFTAYARQGN
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atggccggtcacaatctgcaggacgaacgggtgcgcaccgaggacgtcgagttcgaccgc
agcctccggttcgagcagatgttcctgtcggaggcggtcgtccgggggctgtcgcggaac
aactttgtgatgccgtccccgatccaggcacgtgccatcccgctggggaagctgggacta
gatttgctggtgcaggccaagtccggaacgggcaagacgttggtcttttcggtgttgatt
ttggaagggcacaatccggacgtgccgtttccgcagtcgttggtggttgtgccgacgcgg
gagattgcggtgcagattgagcaggtgttgaataggattgcgtactcgatggcgaatttc
cgggcgaagagcttcatcggcgggttggacatagtgcaggaccggaagaatctgcagaac
tgcacggcggttgtggggacgccggggaggatttggcacctgatcaagagtggcgtgctg
aacatgagtcacattaagatgctggttctggacgaggcggattcgctaatcgctggaacg
ctgcagtcggatgtggaccagatcattaaggcggtgccgaagaagcggcagacgttggtc
tgcagtgcaacgttttacaagaatcgcgatcgcgagctgctcaagtacatgaaggagcag
tttatcggggtgaccccgaagaaggaggtccccgttctgcacggtatccgccagttcgtc
cgcgaactcccggaagccaaggataacatcaaggagatgatggccaagatccatgagctg
gactcgatcttcaaaaagcttcctttcagtcagtgtctgctcttcaccaactcgcaaacc
aaggccgaatcctacagcagccaactgacccgcatcggatggccaacggaggtcatccgc
ggtggccaggagcagcgagttcgcctcaaaacggtggagaatctcaagcagttccgctgc
cgcatcctatccgccacggacgtgatcgcgcgcggtatcgacgccgaaaatgtcaacctg
gtcatcaacgtggacgttccggtggacaacatggtctacctgcaccgcatcggacgtggc
ggccggttcggcactcagtccctcgcaataactctgaccgccaaggcaaaggacacggaa
agattcaggaaaatcctgtttgatattggcggcaacgaaatgttcgtctatcaattgccc
aaagaggagctcgaagagctctggaactttaacgaatacggcgagcggtacccgaaattc
tacgcctccaagctagagcaggagatccgcgacagcggtctagcgccgatcgccgaggtg
gattcgcgaaccgaactggaccgcgcctcggctgaaacgcttaccgacagtctggaccta
ccggcgaagacgtcgtccggcgccttcgaggtggactcgatcgagaaacttcaaagcccc
aaaaaggaggaaactgccgctgaagacgagcaggacggcgaagaactcgtcgaacgaatc
attcccctggatgaacaggttgaggaggttggcgagagacagcaggaaacgctgtccgtt
tgcgatgaggatttaaagcggatcgtcaagccgtcagcgacggcggacgccctgtttcta
gcggcgatggagaagctcgagctggacgaggatgaggagcaaccggagacgagcaaggtg
gactcgccggaagtcgctgaaaaggacgaatcctcgccgaaagctgccgccgctgccgtc
gacgaggtcgacaagctgttcctagcagcaatggaaaagttcgacgaggatgatcaactc
gaagaagtgaaacccgccctggagcagcaggtcaacggcatcgagtcggaggtggtcaac
gaaatgttcctagctgctatggagaaggttgaccaggatgaaacggcgaatggttccgac
gagcaacagcagcaagatgcggtggcggacaagttgttccttgcggcgatggacaaactg
ggctttggagattccgacgataaacctgtcgatttgagcaagaagaaggaacattcgccg
gccgtgatggacaagtttgattcggacggggattcgctggacgcggcttccgggcggcgg
gattcaacgtccagctgttcgacgccgaaatcgccgtgctcgtcggacagttcgttcagc
tcgaacgccaccaagaaggttgaagttggttcgaactttaccacgccgaactcgcgcgtg
caggaaatccgtggtgctggaccggctcaccagatcagctcgtccacgtcggacaactcc
gagctgagccagctgtccgagtccggaggcgctggaggcgtttgtgttccggccgaatcg
aactgtctcccgctggaggtcaacaacgatgctcttttcgcgaagatcatggagcagaag
gaactcgaagccgagcatcatctgcagcgtccgttccagttctcgatcgacgggtgcagc
ctcgaggttcacgacgatccgatcagcgaccgcgacatcaactcgcgcaagggttccgtc
ccggacgtcgtccccagcggaataaccctggacccatctcgactccagaatcgaccacca
tcggccctcgcagccgccatcgaacaggacgaattggccaccttcgatctaaactccaac
cacggttccgtcttcgaacatgacgaaggcgaagaagcggtcgtcccgcaggaaaatcgc
ccgaagcgaatccgcttccaagacggcagcgtttcaaacggcagcggcggcgactcgctc
agcatgaaatccaactcgaaccgagcccaaggcgaacccgacccggaccccctcgccctg
ccacccatcgtggacgccaccgtcgacggaacggaagcgaacgaggacgccagctcgtac
tcgtccgagtacgacagcgaatcgtccaactcgtcgttctttgaccagcgggacgagcac
tgggaagcgacggcggctgccgcctcatcggcagcggttcaaaccgacgagcacagcttg
aaagtgccgacgaagcgacccaaggtcagcaagcgggccaccggggcgtaccatcggacg
tacgccacctggtccaaccaatactggaaccagatgaccatgattcgggattatgcgcgg
tttacggcttacgcaaggcagggcaactga
DBGET
integrated database retrieval system
