Culex quinquefasciatus (southern house mosquito): CpipJ_CPIJ014241
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Entry
CpipJ_CPIJ014241 CDS
T01079
Name
(GenBank) ATP-dependent RNA helicase WM6
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
cqu
Culex quinquefasciatus (southern house mosquito)
Pathway
cqu03013
Nucleocytoplasmic transport
cqu03015
mRNA surveillance pathway
cqu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cqu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CpipJ_CPIJ014241
09122 Translation
03013 Nucleocytoplasmic transport
CpipJ_CPIJ014241
03015 mRNA surveillance pathway
CpipJ_CPIJ014241
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cqu03019
]
CpipJ_CPIJ014241
03041 Spliceosome [BR:
cqu03041
]
CpipJ_CPIJ014241
Enzymes [BR:
cqu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CpipJ_CPIJ014241
Messenger RNA biogenesis [BR:
cqu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
CpipJ_CPIJ014241
Spliceosome [BR:
cqu03041
]
Complex C
Other components
EJC/TREX
CpipJ_CPIJ014241
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
CpipJ_CPIJ014241
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
EDS40025
UniProt:
B0X3U8
LinkDB
All DBs
AA seq
423 aa
AA seq
DB search
MADNDDLLDYEDEDQTEQVAAEPAEQPKKDVKGTYVSIHSSGFRDFLLKPEILRAIVDCG
FEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPTESVPYVLVMCHTRE
LAFQISKEYERFSKYMPSIKVAVFFGGLPIQKDEEVLKSTNPHIIVGTPGRVLALIRNKK
LNLKHLKHFILDECDKMLEQLDMRRDVQEIFRNTPHGKQVMMFSATLSKDIRPVCKKFMQ
DPMEVYVDDETKLTLHGLQQHYVKLKENEKNKKLFELLDVLEFNQVVIFVKSVQRCMALA
QLLTEQNFPAIGIHRGMVQEERLSRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYDM
PEDSDTYLHRVARAGRFGTKGLAITFVSDEGDAKILNEVQDRFDVNITELPDEIDLSSYI
EGR
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggccgataacgacgatcttttggactacgaggacgaggaccagaccgagcaggtggcg
gcggagccggccgagcagcccaagaaggacgtcaagggcacgtacgtgtctattcacagc
tccggcttccgggactttctgctcaagccggagattctgcgcgccatcgtcgattgcggt
ttcgagcatccgtcggaggttcaacacgaatgtatcccgcaggcggtgctcggcatggac
attctgtgccaggccaagtccggtatgggaaagacggcggtgtttgtgctggcgacgctg
cagcagctggaaccgacggagagcgtcccgtacgtgctggtgatgtgccacacgcgcgag
ctggcgttccagattagcaaagagtacgagcgcttctccaagtacatgcccagcattaag
gtcgccgtgttcttcggcggtctgcccatccagaaggacgaggaggtgctcaagtccacg
aacccgcacatcatcgtcggaacgcccgggcgcgtgctcgcgctgatccggaacaagaag
ctgaacctgaaacacctgaagcacttcatcctggacgagtgcgacaagatgctggaacag
cttgacatgcgccgcgacgtgcaggaaattttccgcaacacgccgcacggcaaacaagtc
atgatgttctcggccacgctcagcaaggacatccggccggtgtgcaaaaagttcatgcaa
gaccccatggaagtttacgtggacgacgagaccaagctgaccctgcacggcctccagcag
cactacgtcaagctgaaggagaacgagaagaacaaaaagctgttcgagctgctcgacgtg
ctcgagttcaaccaggtcgtcatcttcgtcaagtcggtgcagcgctgtatggccctggcc
caactcctgaccgagcaaaacttccccgccatcggcatccaccgcggcatggtccaggag
gagcgcctctcgcggtaccagcagttcaaggactttcagaagcgaatcctcgtcgcgacg
aacctgtttgggcgcggaatggacattgagcgcgtcaacatcgtgttcaactacgacatg
ccggaggactcggacacgtacctgcatcgggtggcgcgcgccggtcggttcggaacgaag
gggctggccatcacgttcgtgtcggacgagggcgacgcgaagatcctgaacgaggtgcag
gaccggttcgacgtcaacatcaccgagctgccggacgaaatcgatctctcgtcgtacatt
gaaggacgataa
DBGET
integrated database retrieval system
