Culex quinquefasciatus (southern house mosquito): CpipJ_CPIJ014588
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Entry
CpipJ_CPIJ014588 CDS
T01079
Name
(GenBank) conserved hypothetical protein
KO
K12619
5'-3' exoribonuclease 2 [EC:3.1.13.-]
Organism
cqu
Culex quinquefasciatus (southern house mosquito)
Pathway
cqu03008
Ribosome biogenesis in eukaryotes
cqu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cqu00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CpipJ_CPIJ014588
09123 Folding, sorting and degradation
03018 RNA degradation
CpipJ_CPIJ014588
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cqu03021
]
CpipJ_CPIJ014588
03019 Messenger RNA biogenesis [BR:
cqu03019
]
CpipJ_CPIJ014588
03009 Ribosome biogenesis [BR:
cqu03009
]
CpipJ_CPIJ014588
03016 Transfer RNA biogenesis [BR:
cqu03016
]
CpipJ_CPIJ014588
Transcription machinery [BR:
cqu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
CpipJ_CPIJ014588
Messenger RNA biogenesis [BR:
cqu03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
5' exonucleases
CpipJ_CPIJ014588
Ribosome biogenesis [BR:
cqu03009
]
Eukaryotic type
Pre-60S particles
RNases
CpipJ_CPIJ014588
Transfer RNA biogenesis [BR:
cqu03016
]
Eukaryotic type
tRNA degradation factors
Rapid tRNA decay (RTD) pathway factors
CpipJ_CPIJ014588
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XRN_M
XRN_N
F-ENAs
Motif
Other DBs
NCBI-ProteinID:
EDS40796
UniProt:
B0X5B1
LinkDB
All DBs
AA seq
884 aa
AA seq
DB search
MGVPAFFRWLSRKYPSVIVECVEQKNTDDDGNVLYDDMTKPNPNKVEFDNLYLDMNGIIH
PCTHPEDKPAPRNEDEMMVAIFECIDRLMNIVRPRQVLYMAIDGVAPRAKMNQQRSRRFR
ASKEAAEKATEIAKIREELAAKGCILPPEKEKGAHFDSNCITPGTPFMDRLSKCLQYYVH
DRMNNNPGWKGLKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTHHVLCGADADLIML
GLATHETHFTIIREEFLPNKERPCDICQQMGHEMKDCAGLKSARDCERSPPPPGKETQFI
FVRLNVLKEYLAKELDMPNLPFTYDFERVIDDWVFMCFFVGNDFLPHLPSLEIRENAIDR
LVTLYKKCVYKTKGYLTDSGDVTLDRVELIMTDLGYAEDEIFRNRKVTEDRFKERNKRMK
MQKEREQRPKFDQMHNSQFAPTPLGRGQTPQAIVNPRQEAANFRMGGNNRNQQDSNQDNQ
QPETPDEVRLWEDGFKDRYYESKFDVLPTNMKFRQTVAWEYVRGLCWVLKYYYQGCASWE
WYFPYHYAPFASDFRTLQNVNKHFDRGTPFKPLQQLMGVFPAASRSHVPPAFAELMVDPK
SPIIDFYPIDFHIDLNGKKFAWQGVALLPFVDEKRLFKATDPKVPELTQEERLRNENGLA
RLYLCSGSEAYRTARALYANEVDYEREVPVLAGCMRGLIIPTLENIQQDGVLPSPIPGLH
PVCENKVLTLKFLDPQYDDDFIFPARKLDGAKDQPRVLGANEGPVVGFGPRTDRGRLGQS
GHRMMNHYTGGRGRGGGGGGGGGGGGGGGGGGGGGGNRQNNYQNHRGGYNNQRGGGRGGY
QNNNQGGGGGYGGQRFNNNGQGGGGGGNRNNFGANRFNNNRRNY
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atgggagtaccagcatttttccgctggttatcgcgcaaatatcccagcgttatcgttgag
tgcgtggagcagaagaacaccgacgacgatggcaacgtcctgtacgacgacatgaccaaa
ccgaaccctaataaggtggagtttgacaatctgtatctggacatgaacgggatcattcat
ccgtgtacacatccggaggacaaaccggcgccgcggaacgaggacgaaatgatggtggcc
atcttcgagtgcatcgaccggctgatgaacattgtccgtccgcggcaggtcctgtacatg
gcgattgacggggtggcgccgcgcgccaagatgaaccagcagcgctcgcgacggttccgg
gcgtcgaaggaggcggcggaaaaggcgacggaaattgccaagatccgggaggagttggcc
gcgaaggggtgcatcttgccgccggagaaggaaaagggagcgcactttgattcgaactgc
attacgcccgggacgccgtttatggaccggttgagcaagtgtctgcagtactacgtgcac
gatcggatgaacaacaatcccgggtggaaggggttgaaggtcatcctgtcggacgcgaac
gtgccgggtgagggcgagcacaagatcatggactacatccggaagcaacgcgcccagccc
gaccacgacccgaacacgcaccacgtcctgtgtggcgcagacgccgatctgatcatgttg
ggcctggcgacgcacgagacgcactttaccatcatccgggaggagtttctgccgaacaag
gagcggccgtgcgacatctgccagcagatgggccacgagatgaaggactgcgcggggttg
aagtcggcacgggactgcgaacggtcaccgccacctccgggcaaggagacgcagttcatc
tttgtgcggttgaacgtgctgaaggagtacctggcgaaggagctggacatgccgaacctg
ccgtttacgtacgactttgagcgcgtcattgacgattgggtgtttatgtgcttcttcgtg
ggaaatgactttttgccgcacttgccgagtctggagattcgggagaacgcgattgatcgg
ctggtcacgctgtacaaaaagtgtgtgtacaagacgaagggctatctgacggactccggt
gacgtaacgctcgatcgcgtcgagctgatcatgacggatttgggctacgccgaggacgaa
atcttccgcaaccgaaaggtgaccgaagatcggttcaaggagcgcaacaaacgtatgaag
atgcaaaaggaacgcgagcagcgccccaaatttgatcagatgcacaactcgcagtttgcg
ccgactccgctcggccgcggtcaaaccccgcaggccatcgtgaacccacgccaggaggcg
gccaacttccgcatgggaggcaacaaccgcaaccagcaagactccaaccaggacaaccag
caaccggaaacccccgacgaagtccgcctctgggaagacggcttcaaagatcgctactac
gagtccaagttcgacgtgctccccaccaacatgaagttccgccaaaccgtagcctgggag
tacgtccgcggactctgctgggtcctcaagtactactaccaaggttgcgccagctgggag
tggtacttcccgtaccactacgccccattcgcgtccgatttccgcaccctgcagaacgtc
aacaagcactttgaccgcggaaccccgttcaaaccgctccagcagctgatgggggtgttc
cccgcggcgagtcggagtcacgtgccgccggcgtttgccgagctgatggtggaccccaag
tcgccgatcatcgacttttatccgattgatttccacatcgatttgaacgggaagaagttt
gcgtggcagggcgtcgcgctgctgccgtttgtcgacgagaagcggctgttcaaggcgacc
gatccgaaggtgccggagctgacgcaggaggaacgattacgcaacgagaacggcctggcc
cggctgtacctgtgttccggctccgaggcgtaccgcacggcccgcgccctctacgccaac
gaggtggactacgagcgcgaggtgccagtgctggccgggtgcatgcgcggtctcatcatt
ccgaccctggaaaacatccaacaggacggtgtcctcccgtcgccgattccgggcctccac
ccggtgtgtgaaaacaaggtgctcacgctcaagttcctggacccgcagtacgacgacgac
tttatcttcccggcccggaagctggacggtgcgaaggatcaaccgcgggtgctcggcgcc
aacgagggtcccgtggttgggttcggtccgcggacggatcgtggccggttagggcagtcc
ggtcatcgcatgatgaaccattacaccggaggaaggggcagaggaggcggtggcggtggt
ggaggaggaggaggaggaggaggaggaggtggaggaggaggaggaggtaacaggcagaat
aactatcagaatcaccgcggtgggtacaacaatcagcggggaggtggaagaggaggttat
cagaacaataaccagggtgggggaggaggttatggaggacagaggttcaacaacaacggt
cagggtggaggcggaggtggcaataggaacaactttggggcgaaccgtttcaacaacaat
cggagaaattactag
DBGET
integrated database retrieval system
