Culex quinquefasciatus (southern house mosquito): CpipJ_CPIJ014618
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Entry
CpipJ_CPIJ014618 CDS
T01079
Name
(GenBank) LSM8 protein
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
cqu
Culex quinquefasciatus (southern house mosquito)
Pathway
cqu03018
RNA degradation
cqu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cqu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CpipJ_CPIJ014618
09123 Folding, sorting and degradation
03018 RNA degradation
CpipJ_CPIJ014618
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cqu03019
]
CpipJ_CPIJ014618
03041 Spliceosome [BR:
cqu03041
]
CpipJ_CPIJ014618
Messenger RNA biogenesis [BR:
cqu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
CpipJ_CPIJ014618
mRNA degradation factors
5'-3' decay
Lsm complex
CpipJ_CPIJ014618
Spliceosome [BR:
cqu03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
CpipJ_CPIJ014618
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
DUF150_C
Motif
Other DBs
NCBI-ProteinID:
EDS42617
UniProt:
B0X8M5
LinkDB
All DBs
AA seq
95 aa
AA seq
DB search
MSGLESYVNNTVSIITADGRNFVGTLKGFDQTVNIILDESHERVYSMTAGIEQVVLGLHI
IRGDNVAIIGQLDESVDSKLDFSSIRGMPLEPVVH
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atgtccgggctagaatcgtacgtgaacaacacggtctcgatcatcaccgccgacgggcgc
aatttcgtcggaacgttgaagggattcgaccaaacggtaaacatcatcctggacgaatcg
cacgagcgggtctactcgatgacggccggcatcgagcaggtcgtgctggggctgcacatc
atccggggcgacaatgtggccatcatcgggcagctggacgagagcgtggacagcaagctg
gacttttccagcatccgtggcatgccgctggagccggtcgtgcactga
DBGET
integrated database retrieval system
