KEGG   Culex quinquefasciatus (southern house mosquito): CpipJ_CPIJ015649
Entry
CpipJ_CPIJ015649  CDS       T01079                                 
Name
(GenBank) DNA-binding protein smubp-2
  KO
K18422  helicase MOV-10 [EC:5.6.2.5]
Organism
cqu  Culex quinquefasciatus (southern house mosquito)
Brite
KEGG Orthology (KO) [BR:cqu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cqu03019]
    CpipJ_CPIJ015649
   03036 Chromosome and associated proteins [BR:cqu03036]
    CpipJ_CPIJ015649
Enzymes [BR:cqu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.5  RNA 5'-3' helicase
     CpipJ_CPIJ015649
Messenger RNA biogenesis [BR:cqu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     CpipJ_CPIJ015649
Chromosome and associated proteins [BR:cqu03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Other miRNA pathway proteins
     CpipJ_CPIJ015649
SSDB
Motif
Pfam: AAA_12 AAA_11 ResIII AAA_30 AAA_19 UvrD-helicase zf-C2H2_4 zf-C2H2_6 zf-C2H2 zf-C2H2_jaz PIF1 AAA_16 zf-met zf-C2H2_2 AAA_7 AAA AAA_22 zf-C2H2_9 B129_C2H2-zf
Other DBs
NCBI-ProteinID: EDS42512
UniProt: B0X8H6
LinkDB
AA seq 917 aa
MQDVTVRRRKSRGKLQGRHNASLACLADVNNNNSTNICKTSDSFYDKPWKDQRRNSHPAK
AKSCTELRIVGKAERRHAAGFHTRRCICRWVMSYGRLLWPDQLKLDFSQGCPVCRVSFST
EEALRNHMQKQHGRDFDVMLDVTDRRIVRSTMRLTVKYLARASRMIIRVENYSEVVLILR
AVYLFGLDQRLESTFDGVLRMVPGYSYEIEHTVKQCIPNYQYTMILSATVAGSQVELIEQ
YYVQMLKSTPMAGNQLKMGILPYHHIPQYLIDLYLKEFEHDNHYDRLAMLCLENLRKFNK
AGLTPTSYVEHLRLLNMIEDYDLQTTFATYTIPKVTLKPMEQARRYLITLDQFDVPPNLL
EEDGYARITVTKHNRNVDNNLEFINGYIDAVNETGIVVTMQAPVRFTLPCRVEFPLNRTQ
YKLEYEALAHISKIDLDQLLFPKVLAKKRRPVRQVKFDWFQPTIAANAEQVTAIRNIVNM
TSYPAPYIIFGPPGTGKTSTIVEAVLQIWRQQPRAHVLVAASSNFACNELTQRLMRFVPE
ADIFRFFSRSCERNIETIDMEILEISNLATGIYEIPTYEHIYGSRIVVSTVTNCGRLAQA
HVIPTFFDYIFIDECGSAKEISALVPIAGVGTEGSKIHASVILAGDPKQLGPVVRFEFLK
KTVHNTSLLERLMAQGIYKRDPNTGEFNSLVITKLLDNYRSHKSLIHFSNEWFYEGELRA
RAASELTDWAINWNCLPNMAFPIIFHSVVGITRVDKQSCSSFNKEEAQKVLFYVQKMLTD
GINERQIREQDIGIVSPYRRQVSFLRQGCRNYGWEEIEVGSAEQFQGREKPVIIVSTVRS
QRKHVGFLANTRRLNVVITRARCLLIIIGNPDTLQNDPHWYRLLRYIYENNGVRGIDFVL
RKPEDNFAAREEEEDFA
NT seq 2754 nt   +upstreamnt  +downstreamnt
atgcaggatgtaaccgttcgtcgccggaaaagccgcggcaagcttcagggtcgccacaat
gcctcgctggcgtgcctggccgacgtcaacaacaacaacagcaccaacatctgtaagacc
agcgacagcttctacgacaagccttggaaggatcaacggcggaactcgcacccggccaag
gccaagtcctgcaccgagctgcgcatcgtgggcaaggccgagcgtcgtcacgcggccgga
tttcacacgcgccggtgcatctgccgctgggtcatgtcgtacgggcggctgctgtggccg
gatcagctgaagctggactttagccagggctgtccggtgtgtcgggtgagtttctcgacg
gaggaagccctccggaaccacatgcagaagcagcatgggagggattttgacgtcatgtta
gacgttacggatcgtcggattgtgcgttccacgatgcggctgacggtcaagtatttggcg
cgcgcctcgcggatgattataagggtggagaactactcggaggttgtgctgattttgcgc
gcggtttacctctttggcttggatcaacggctggagtcgacgttcgacggcgtgctgcgt
atggtgccgggctattcgtatgaaatagagcacaccgtgaagcagtgcatcccgaactat
cagtatacgatgatcctgtcggcgacggtggccggcagtcaggtcgaactcatcgagcag
tattacgtgcagatgctgaagagcacgccgatggcgggaaaccagctgaagatgggcatc
ctgccgtaccatcacattccccagtacttgatcgatctatatctgaaagagtttgaacac
gacaaccactacgatcgcttggcgatgctctgcctggagaacctacgcaaattcaacaag
gccggcctcacacccaccagctacgtcgagcacctgcgcctgctcaacatgatcgaggac
tacgacctgcaaaccaccttcgcaacgtacaccatcccgaaggtcacgctcaaaccgatg
gagcaagcccggcgctacctgatcacgctggatcagttcgacgttccgcccaacctgctg
gaagaggacggttacgcccggatcaccgtcaccaagcacaaccgcaacgtggacaacaac
ctggagttcatcaacgggtacatcgacgccgtcaacgagaccgggatcgtggtgacgatg
caggcgccggtccgcttcacgttgccctgccgggtcgagttcccgctgaaccgtacccag
tacaagctggagtacgaggcgctggcgcacatcagcaagatcgacctcgaccagctgctg
ttcccgaaggtgctggccaagaagcggcgaccggtgcggcaagtcaagttcgactggttc
caaccgacgatcgccgccaacgcggaacaggtcacggccatccgcaacatcgtcaacatg
acgtcctacccggcgccgtacatcatattcggcccacccggaacgggaaaaacgtcgacg
attgtcgaggcggtgctgcagatctggcgccagcagccacgcgctcacgtccttgtggcc
gcttcgtccaactttgcgtgcaacgagctgacccagcggttgatgcgcttcgtgccggag
gcggacattttccggttcttttcgcgttcctgcgagcggaacatcgaaacgatcgatatg
gaaatcttggagatttccaacctggcgacgggaatctacgagataccgacgtatgagcac
atttacggcagtcgtattgtggtcagcacggtcaccaattgtggccggttggcgcaggca
cacgttattccgacgtttttcgattatatctttatcgatgagtgtgggagtgcgaaggag
atttcggccttggttccgatcgccggagtaggcactgaagggagcaagattcatgccagc
gttatattggctggagatccgaagcagctggggccggtggtgcggtttgagtttctcaag
aagaccgtccacaatacatcgctgctggagcggttgatggcgcaaggaatctacaagcgc
gatccaaacaccggggagttcaacagcttggtcatcactaagctgctggataactaccga
tctcacaagtcgctgattcacttctcgaacgagtggttctacgagggtgagctgcgcgct
cgtgccgcgtcggaactgaccgattgggcaatcaattggaactgccttccgaacatggca
ttcccgatcatctttcactcggttgtgggaatcacccgagtcgacaagcagtcctgcagt
tcgttcaacaaggaggaagcccagaaagtactcttttacgtgcagaaaatgctcaccgac
ggaatcaacgagcgccagattcgggaacaggacatcggaatcgtttccccgtaccggcgg
caggtttcgttcctgcggcaaggttgtcgcaactatggctgggaggagatcgaagtcggc
tcggccgaacagttccaaggtcgcgaaaagcccgtcatcatcgtttccaccgtgcggtcc
cagcgcaagcacgtgggattcctcgcaaacaccaggcgcctgaacgtggtcataactcga
gcccgttgtttgctgatcatcatcggtaatccggacacgctgcagaacgatccgcactgg
tatcgtctgttgcgttacatttacgagaacaatggcgtgcgcgggattgactttgtgctg
cgcaaaccggaagataactttgcggctagggaggaggaagaagactttgcttaa

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