Culex quinquefasciatus (southern house mosquito): CpipJ_CPIJ016636
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Entry
CpipJ_CPIJ016636 CDS
T01079
Name
(GenBank) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
cqu
Culex quinquefasciatus (southern house mosquito)
Pathway
cqu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cqu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CpipJ_CPIJ016636
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cqu03041
]
CpipJ_CPIJ016636
Spliceosome [BR:
cqu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
CpipJ_CPIJ016636
Complex C
U5 SnRNP specific factors
CpipJ_CPIJ016636
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
RRM_4
JAB
PROCT
Motif
Other DBs
NCBI-ProteinID:
EDS43952
UniProt:
B0XAY2
LinkDB
All DBs
AA seq
2340 aa
AA seq
DB search
MAIPPYMIPPNQWAAHMMAQQQAFAVQQAQAQQQHAQHMHAQQLAATQMQIPPPMAPIPP
PGPPKPDPVLSQEKLMEKAQKWSQLQTKRFAEKRKFGFIDAQKEDMPPEHIRKIIRDHGD
MTSRKYRHDKRVYLGALKYMPHAVMKLLENMPMPWEQIRDVPVLYHITGAITFVNEIPWV
IEPVYIAQWGTMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYADNVLDVEPLEAIQIEL
DTEEDASVHDWFYEHRPLIGTPYVNGSTYRKWNLALPQMACLYRLANQLLTDLVDSNFFY
LFDPKSFFTAKALNMAIPGGPKFEPLIKDHNVGDEDWNEFNDINKIIIRQPIRTEYRIAF
PYLYNNMPALCAPLMVSFNVSSTFKIVSHCKLEPNRHTLDCVLIPDGKSKSASYHMPNVV
FIKTEDPDLPAFYFDPLINPIAHRHAVKSAEPLPEDDEEFTLPEEVQPFLQDTPLYTDNT
ANGISLLWAPRPFNMRSGRCRRAIDIPLVKGWYKEHCPPGHPVKVRVSYQKLLKYYVLNA
LKHRKPKPQKKRYLFRSFKATKFFQTTTLDWVEAGLQVCRQGYNMLNLLIHRKNLNYLHL
DYNFNLKPVKTLTTKERKKSRFGNAFHLCREILRLTKLIIDSHVQYRLNNVDAFQLADGL
QYIFAHVGQLTGMYRYKYKLMRQIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAPGWRVWL
FFMRGITPLLERWLGNLLSRQFEGRHSKGVAKTVTKQRVESHFDLELRASVMHDIVDMMP
EGIKQNKARTILQHLSEAWRCWKANIPWKVPGLPIPIENMILRYVKMKADWWTNTAHYNR
ERIRRGATVDKTVCKKNLGRLTRLYLKAEQERQHNYLKDGPYISPEEAVAIYTTTVHWLE
SRRFAPIPFPPLSYKHDTKLLILALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEAL
SRIKRHLLTQRAFKETGIEFMDLYSHLIPVYDVEPLEKITDAYLDQYLWYEADKRRLFPP
WIKPSDTEPPPLLVYKWCQGINNLQDVWDVSEGECNVLLESRYEKLYEKIDLTLLNRLLR
LIVDHNIADYMSAKNNVVINYKDMNHSNSYGIIRGLQFASFIAQYYGLVLDLLVLGLQRA
SEMAGPPQMPNDFLTFQDVATETTHPIRLYCRYVDRIHIYFRFTAEEARDLIQRYLTEHP
DPNNENIVGYNNKKCWPRDARMRLMKHDVNLGRAVFWDIKNRLPRSVTTVQWDNTFVSVY
SKDNPNLLFNMCGFECRILPKCRTQNEEFTHRDGVWNLQNEVTKERTAQCFLRVDDESLS
RFHNRVRQILMASGSTTFTKIVNKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTR
IKIGLNSKMPSRFPPVVFYTPKELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFRSGMS
HDEDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEANAQNRRLTLEDLEDSWDRGIPR
INTLFQKDRHTLAYDKGWRIRTEFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQAL
GGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKYKKLTNAQRSGLNQIPNRRFTLWW
SPTINRANVYVGFQVQLDLTGIFMHGKIPTLKISLIQIFRAHLWQKIHESIVMDLCQVFD
QELDALEIETVQKETIHPRKSYKMNSSCADILLFPAYKWNVSRPSLLADTKDTMDNTTTQ
KYWLDVQLRWGDYDSHDVERYARAKFLDYTTDNMSIYPSPTGVLIAIDLAYNLHSAYGNW
FPGCKPLIQQAMAKIMKANPALYVLRERIRKALQLYSSEPTEPYLSSQNYGELFSNQIIW
FVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAK
WKTAEEVAALIRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLK
VEKFGDLILKATEPQMVLFNLYDDWLKTISSYTAFSRLILILRALHVNTERTKVILKPDK
TTITEAHHIWPTLTDEEWIKVEVQLKDLILADYGKKNNVNVASLTQSEIRDIILGMEISA
PSAQRQQIAEIEKQTKEQSQLTATTTRTTNKHGDEIITSTTSNYETTTFSSKTEWRVRAI
SATNLHLRTNHIYVSSDDIKETGYTYILPKNILKKFVTISDLRAQIAGYLYGVSPPDNPQ
VKEIRCIVMPPQWGTHQQINLPNSLPSHQYLKDMEPLGWIHTQPNELPQLSPQDITTHAK
VMSENPTWDGEKTIIITCSFTPGSCSLTAYKLTPSGYEWGHKNTDKGNNVNLGDENGGLP
NT seq
7023 nt
NT seq
+upstream
nt +downstream
nt
atggcgattccaccgtacatgattccgccgaaccagtgggccgcccacatgatggcccag
cagcaggcgttcgcggtccagcaggcccaggcgcagcagcagcacgctcagcacatgcac
gcccagcagttggccgcgacgcagatgcagattccgccgccgatggcaccgattccgccg
ccgggtccgcccaagccggacccggtgctgtcgcaggagaagttgatggagaaggcgcaa
aagtggtcacagctgcagacgaagcggtttgcggagaagcggaagtttggatttattgat
gcgcagaaggaggacatgccgccggagcatattcggaagattatacgggatcatggggac
atgaccagtaggaagtatcgtcatgataagcgtgtttacttgggtgcgctcaagtacatg
ccacatgcggttatgaaactgctggagaatatgcccatgccgtgggagcagattcgggac
gttccggttctgtaccacatcacgggggcgattacgttcgtgaacgagattccgtgggtt
attgagccggtttacattgctcagtggggcacgatgtggatcatgatgcgtcgtgagaag
cgcgatcgtcgtcactttaagcggatgcggtttccgccctttgacgatgaagaacctccg
ctggattacgcggacaacgtgttggacgtggaaccgctggaggcgatccagatcgagctg
gacaccgaggaggacgccagcgtgcacgattggttctacgagcaccgtccgttgattggg
acgccgtacgtgaacgggtcgacgtatcgcaagtggaacctggccctgccacagatggcc
tgtttgtaccgcttggccaaccagctgctgaccgatctggtcgacagcaacttcttctac
ctgttcgacccgaagagcttcttcaccgccaaggcactcaacatggccattccgggggga
ccgaagttcgaaccgctcatcaaggatcacaacgtcggggacgaggactggaacgagttc
aacgacatcaacaagatcatcattcggcagccgattcgtaccgaataccggattgcgttc
ccgtatttgtacaacaacatgcccgcactttgtgcacctctcatggtgagtttcaacgtt
tcatcgactttcaaaattgtaagccattgcaaattagagcccaatcgtcacaccctggat
tgcgttcttattcccgatggcaagagcaaatccgcgtcgtaccacatgccgaacgtggtg
ttcatcaagacggaagatccggacctgccggcgttctactttgacccgctgatcaatccg
atcgcgcaccgtcacgcggtcaagtcggcagagccgctacccgaagacgacgaggagttc
accctgccggaagaggtgcaacccttcctgcaggacaccccactctacacggacaacacg
gcgaacgggatctcgctgctgtgggcgccgcggccgttcaacatgcgctcggggcggtgt
cgccgggcgatcgatattccgctcgtcaagggctggtacaaggagcactgcccgccggga
catccggtcaaggtgcgcgtgagctaccaaaagctgctcaagtattacgtgctgaacgcg
ctcaagcaccgcaagccgaagccgcagaagaagcggtatctgttccggtcgttcaaggcg
accaagttcttccagacgacgacgctggactgggtggaggccgggctgcaggtctgccgc
cagggctacaacatgctgaacctgttgattcaccggaagaacttgaactatctgcacttg
gattacaacttcaacttgaagcccgtcaagacgctgaccacgaaggagcgtaaaaagtcc
cggttcggaaatgcgttccacttgtgtcgggagattctgcgcttgaccaagctgatcatc
gactcgcacgtgcagtaccggttgaacaacgtggacgcgttccagctggcggacggtctg
cagtacatctttgcccacgtcggccagctgaccggaatgtaccgctacaagtacaagctg
atgaggcagatccggatgtgcaaggatttgaagcacttgatctactaccgcttcaacacc
ggcccggtcggaaaaggtcccggctgtggcttctgggcaccgggttggcgcgtgtggcta
ttcttcatgcgcggaatcacacccctgttggaacgctggctgggcaacttgctctctcgt
caattcgagggtcgtcactcgaagggcgtcgccaagacggtcaccaaacagcgcgtcgag
tctcactttgatctggaactgcgcgcctccgtcatgcacgacatcgtggacatgatgccc
gagggaatcaaacagaacaaggctcgtaccatcctccagcacctctccgaagcgtggcgc
tgctggaaggccaacatcccctggaaggtccccggactccccattcccatcgaaaacatg
atcctgcgttacgtcaagatgaaggccgactggtggaccaacaccgcccactacaaccgg
gaacgtatccgtcgtggcgccaccgtagacaaaaccgtctgcaaaaagaacctcggccga
ctcacgcgtctctaccttaaagccgaacaggaacgccaacacaactaccttaaagacggc
ccgtacatctcccccgaggaagccgtcgccatctacaccacgaccgtgcactggctcgag
tcccgccggttcgccccaatccccttccccccactctcctacaaacacgacacaaaactg
ctcatcctagccctagaacgtctcaaggaagcatacagcgttaaatcccgcctcaaccag
agccagcgcgaagaacttggcctgatcgagcaggcgtacgacaacccgcacgaggcgctg
tcccgaatcaagcgtcacctgctgacgcagcgagcgttcaaagagacgggaatcgagttc
atggacctgtacagccacctcatcccggtgtacgacgtggaaccgctggagaagattacg
gacgcgtacctcgatcagtacctgtggtacgaggcggacaagcggcgcctgttcccgccg
tggattaagccgagcgacacggagccgccgccgctgctcgtgtacaagtggtgtcaaggc
atcaacaacctgcaggacgtgtgggacgtatcggagggcgagtgcaacgtcttactcgaa
tcccgctacgagaagctgtacgaaaagatcgatcttacgctgctcaaccgtttgctgcgt
ctgattgtcgaccacaatattgccgattacatgtccgccaagaacaacgttgtcatcaac
tacaaggacatgaaccactccaacagttacggaatcatccgcgggctgcagtttgcctcg
tttatcgcccagtactacgggctggtgttggatctgctggtgctgggtctgcagcgggcc
agcgaaatggccggaccgccccagatgccgaacgatttcctcaccttccaggacgtcgca
acggagacgacgcacccgattcggctgtactgtcggtacgtggaccggattcacatctat
ttccgcttcacggcggaggaggcgcgtgacttgatccagcgctatctgacggaacatccg
gatccgaacaacgagaacattgtcgggtacaataataagaagtgctggccgcgggatgcc
cggatgcggttgatgaagcatgacgtcaatctggggagggccgtgttttgggacattaag
aacaggctgccgcgatcggtgacgacggtgcagtgggacaacacgttcgtgtcggtttac
tccaaggacaatccgaatctgctgtttaacatgtgcgggtttgagtgcaggattctgccc
aagtgtcgcacccagaacgaggagttcacccaccgggacggcgtgtggaatctgcagaac
gaagtcacgaaggagcgtacggcgcagtgtttcctgcgcgttgacgacgagtccctctcg
cggttccacaaccgcgtgcggcagattttgatggcttccgggtcgacgacgttcaccaag
atcgtcaacaagtggaacacggcgctgatcgggctgatgacgtacttccgcgaggcggtc
gtaaacacgcaggagctgctggatctgctggtcaagtgcgagaacaaaattcagacgcgt
atcaagatcgggctgaactcgaagatgccttcgcgtttcccgccggtggtgttttacacg
ccgaaggagctgggcgggttgggcatgttgagcatgggtcacgtgttgattccgcagtcg
gatctgcgctggtcgaagcaaacggacgttgggataacgcacttccggtccggtatgtcg
cacgacgaggatcagctgattccgaacttgtaccggtacattcaaccgtgggagagtgag
tttatcgactcgcagcgagtttgggcggagtacgcgttgaagcggcaggaagcgaacgcg
cagaacaggcggttgacgctggaggatttggaggacagctgggatcggggtattcctcgg
attaacacgctgttccagaaggatcgtcacacgctggcgtacgacaaaggttggcgaatc
cggacggagtttaagcagtatcaggtgctgaagcagaatccgttctggtggacacatcag
cgccacgacggcaagttgtggaacttgaacaactaccgtacggacatgattcaggcgttg
ggtggcgtcgagggcattctcgagcatacgctgttcaagggaacgtacttccccacctgg
gagggattgttctgggagaaggcatccgggttcgaagagtcgatgaagtacaagaagctg
accaacgcgcagcgttccggtttgaaccagattccgaaccgtcgcttcacgctctggtgg
tctccgacgatcaaccgtgccaacgtgtacgtcggtttccaggtgcagctcgatctgacc
ggtattttcatgcacggtaagattccgacgctgaagatttcgctcatccagatcttccgt
gcccatttgtggcaaaagattcacgagtcgatcgtgatggatctgtgccaggtgtttgat
caggagctggacgcgctggaaattgaaaccgtgcaaaaggaaacgatccaccctaggaag
tcgtacaagatgaactcgtcctgcgcggacatcctgctcttcccggcttacaagtggaac
gtctcaagaccttcccttctggcggacacaaaagacacgatggacaacaccacaacgcaa
aagtactggctggacgtccagcttcgttggggagattacgactcgcacgacgtcgaacgt
tacgcccgagcgaagttcctcgattacacaacggacaacatgtcgatctacccgtcgcca
acgggcgttctgatcgcgatcgatctcgcttacaaccttcacagcgcctacggcaactgg
ttccccggctgcaaaccgctcatccaacaggccatggccaagatcatgaaggccaacccg
gctttgtacgtgttgcgcgagcgtatccgcaaggctctccagctgtacagttcggaaccc
acggaaccgtatctatcgtctcaaaactacggagaactgttctccaaccagatcatctgg
ttcgtggacgacaccaacgtgtaccgcgtgacgatccacaagacgttcgagggtaacttg
acgacgaagcccattaacggagcgattttcatcttcaatccgcgcaccgggcagctcttc
ctgaagatcattcacacctcggtgtgggccggtcagaagcgtctcggccagctggccaag
tggaagacggccgaagaagtggccgcgctgattcgatcgcttccggtggaggaacaaccc
aagcagattatcgtcacccgaaagggcatgttggatccgctggaggtgcacttgttggat
ttccccaacattgtcattaaggggtcggaactgcagctgcccttccaggcttgcctgaag
gtggagaagtttggtgatttgattctgaaggccaccgaaccgcagatggttctgttcaac
ctgtacgacgactggctgaagaccatttcttcgtacacggcgttctcgcgtttgattttg
atcctgcgcgcgctgcacgtcaacaccgagcgaaccaaggtcatcctgaaaccggacaag
accaccataaccgaagcccatcacatctggccgacgctgaccgacgaggagtggatcaag
gttgaggttcagctcaaggatttgattctggcggattacggcaagaagaacaacgtcaac
gttgcctcgctcacgcagtcggaaattcgtgacatcatcctgggtatggaaatctccgcg
ccgtccgcccagcgtcaacagattgccgaaatcgagaagcaaaccaaggagcagagccag
ctgacggcgaccacgacgcgaaccacgaacaaacacggagacgaaattatcacctccacc
acgagcaactacgaaacgaccacgttcagctcgaagacggagtggcgcgtgcgtgccatt
tcggcgaccaacctgcacctccgcacgaaccacatctacgtcagctcggacgacatcaag
gaaaccggctacacgtacatcctcccgaagaacatcctgaagaagtttgtcacgatcagc
gatttgcgtgcccaaatcgccggctatctgtacggcgtcagcccgccggataacccacag
gtcaaggagatccgctgtatcgtaatgccaccccagtggggaacccaccagcagatcaac
ctgcccaactcgctcccctcccatcaatacctcaaagacatggaaccgctcggctggatc
cacacccaaccgaacgagttgccccaactctcgccccaggacatcaccacccacgccaag
gtcatgtccgagaaccccacctgggacggtgaaaagaccatcatcatcacgtgctccttc
acgcccgggtcctgctcgctcaccgcgtacaaactcaccccgtccggctacgagtggggc
cacaaaaacaccgacaagggcaacaatgtgaatctgggcgatgaaaacggtggccttccg
tag
DBGET
integrated database retrieval system
