Culex quinquefasciatus (southern house mosquito): CpipJ_CPIJ018359
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Entry
CpipJ_CPIJ018359 CDS
T01079
Name
(GenBank) activating signal cointegrator 1 complex subunit 3
KO
K12854
pre-mRNA-splicing helicase BRR2 [EC:
5.6.2.6
]
Organism
cqu
Culex quinquefasciatus (southern house mosquito)
Pathway
cqu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cqu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CpipJ_CPIJ018359
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cqu03041
]
CpipJ_CPIJ018359
Enzymes [BR:
cqu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
CpipJ_CPIJ018359
Spliceosome [BR:
cqu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
CpipJ_CPIJ018359
Complex C
U5 SnRNP specific factors
CpipJ_CPIJ018359
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
SNRNP200_wHTH
DEAD
ResIII
PhoH
AAA_22
Helicase_C
AAA_30
HTH_61
Motif
Other DBs
NCBI-ProteinID:
EDS27065
UniProt:
B0XFU6
LinkDB
All DBs
AA seq
1063 aa
AA seq
DB search
MFAPPLLNNASAIDPSLAIDAGSARHIGCFCFEFLPAAGGLPHQLAANLWKSGLIKYDRK
SDNFQVTRIGRMSGEFRNITVREEETLELQKLMERVPIPIKESMEEPSAKVNVLLQAYIS
QLKLEGFALMADMVYVTQSASRLLRAIFEILADKCLRLCKMIGRRMWQGDREEELPVEAA
VRSGGERDRRVDSSAEAGQDHLQVRVPVPQAVAVHAHSTCIQPITRSTLRVELTITPDFQ
WDEKVHGQSEAFWILVEDVDSEVILHHEYFLLKYKYCQDDHLVKFFVPVFEPLPPQYFLR
IVSDREEPAPTELLDLQPLPISALCEPRFEELYADRFPQFNPIQTQVFNAVYNSEDNVFV
GAPTGSGKTTIPEFAVLRMLQQNPHDRVVYLVSRDALAELIFMDWHQKFGQNLGGKVVKL
TGETGWVKLIAKGQIIERKNVQNIQLFIVDELQLIGGEEGPVLEVVCSRMRYISSQIEKL
ILTIALSNARDRIAAMSKPVYNAVTKFSPHKPVIVFVSSRKLARLTAIDILAYCAAEAQP
NRFFHTEEEDIKPFLDRMTDKTLKETLSQGVAYIHEGLTASDHRIVEQLFDSGAVQIGVV
TRDLCWGLNISAYLLIIMDTQFYNGKSHSYVDYPVTDVIRWRRSNLSANEVAVIQLVTPN
DVYMKEVLQVSEKGRRLLRLGVRTGKVTLNLKNAKRIGASSQLTGMRSEVATTGNIEPQF
VEVQIACRDVGGLRDDLGLATKRSFWIEVVEPLRSYIKLALAGFIHFATGSRKSQDTLHD
RIRQLLINPEPMPLVANRSITGMKANGTESFISLWANRPLEDDNAKCVLMCQSSKKDFFK
KFLNESLPVESHLDHRMHDHFNAEIVTKTIENKQDAVDYLTWTFLYRRLTHNPNYYNLQG
VTHRHLSDHLSELVESTLSDFGAVQVHQCGGRDGYAAAESGHDRGVCLNTKCSQKINFDQ
SPFRYIDPHIKTNLQLQAHLFRIQQLSSTDRSRTNCFPRIMPIDRVLLLHDGNVTIYPMS
KDSVDSSWLGLPPLGALLPPRCVSRVVPRNAAGGSASRIRNRF
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atgtttgctcctccgttgctgaacaacgcatcagcgatcgacccgagtttggccatagac
gctggttcggctcggcacattggatgtttttgttttgaatttttacccgctgctggaggg
cttccgcaccaacttgctgcaaacctgtggaagagcggtctcatcaagtacgaccgcaaa
agtgacaacttccaggtcaccagaatcggtcgaatgtccggcgagttccggaacataacg
gttcgcgaggaagagacactcgagctgcaaaagctgatggagcgcgttccgatcccgatc
aaggaaagcatggaagaacccagtgccaaggtcaacgtcctcctgcaagcctacatctcc
cagctgaaactcgagggctttgccctgatggccgacatggtgtacgtgacccagtctgcg
tcccgtctgctgcgtgccatcttcgagattctggcggacaagtgcctaaggctgtgcaag
atgatcggtcggcgcatgtggcagggagatcgagaagaagaacttcccgtggaagcggct
gtacgatctggaggcgaacgagatcggagagttgattcgagtgccgaagctgggcaagac
catctacaagtacgtgtaccagttccccaagctgtagctgtccacgcacattcaacttgc
attcaaccgattacgcgttctacgctgcgcgtcgagttgaccatcacgccggacttccag
tgggacgagaaggttcacggccagtcggaggcgttctggattttggttgaggacgtcgat
tccgaggttatcctgcaccacgagtacttcctgctcaagtacaagtactgccaggacgat
cacctggtgaagttcttcgtgccggtgtttgaaccgttgccaccgcagtacttcctgcgc
atcgtgtccgaccgagaagaacctgccccgacggagctgctcgatttgcagccgctgccg
atcagtgcgttgtgtgagccacgcttcgaagagctgtacgcggaccgattcccgcagttc
aatccgatccagacgcaggtcttcaacgcggtgtacaacagtgaggacaatgtgtttgtg
ggtgcgccaaccgggtcgggcaagacgacgatcccggagtttgccgtgctgcggatgttg
cagcagaatccgcacgatcgggttgtttatctggtctcgagggacgcgctggccgagctg
atcttcatggattggcaccagaagtttggccagaacttgggcggcaaggtggtcaagctg
acgggggaaaccggatgggtgaagctgatcgccaaggggcaaatcatcgagaggaagaac
gtccagaacatccagctgtttattgtggatgagctgcagttgattggcggtgaggaaggt
cctgtgttggaggtcgtctgctcccgtatgcggtacatttcgtcccagattgagaagctg
atcctgaccatcgcgctgtcgaacgcccgggaccgcattgcggccatgtccaaaccggtg
tacaacgccgtaaccaagttcagcccgcacaaaccggtgattgtgtttgtgagctcgagg
aagttggctcgcttgacggcgattgatattttggcttactgtgctgctgaagctcaaccg
aaccggttcttccacaccgaggaggaggacattaagccgtttttggatcgcatgacggat
aaaacgttgaaggagacactctcgcagggtgttgcgtacatccacgaaggcttgacggcg
tctgatcatcgcatcgtggaacagctgttcgattccggtgcggtgcagattggcgtcgtc
acgcgggatctgtgctggggcttgaacatttctgcctacctgttgatcatcatggacacg
cagttctacaacggtaagagtcactcgtacgtggactacccggtcacggatgtcattcgc
tggaggcgttcgaatctgagtgcaaatgaagtggccgtgatccagttggttaccccaaac
gatgtctacatgaaggaagtgctgcaggtctcggaaaaagggaggaggctgttgcggctg
ggagttcggaccgggaaagtaacattaaatctgaaaaacgctaagcgaatcggtgcaagt
agccagctcactggcatgcgatccgaggttgcgaccaccggtaatattgagccgcaattt
gttgaagtccaaatcgcttgtcgagatgttggtggtctaagagacgatttgggactagct
acgaagagaagtttctggatcgaagtcgtcgagcctcttcggagctacataaaacttgct
ctcgctggcttcattcattttgcgaccggtagtcggaagtcccaggacacgttacatgac
cgaatccggcagctgctaatcaacccggaaccgatgccgttagtggccaaccgttccatc
actgggatgaaagcaaacggaacagaatcttttattagtctatgggccaaccgtccgcta
gaggatgacaacgccaagtgcgtgctgatgtgtcagagctccaaaaaggacttcttcaag
aagttcctcaacgagagtttaccggtggaaagtcatctggatcatcgtatgcacgatcac
ttcaacgcggagatcgtcaccaaaaccattgaaaacaaacaggacgccgttgattacctt
acctggacgttcctgtatcggcgactcacccataacccgaactactacaacctgcagggc
gtcacccaccgacacttgtcggaccacctgtccgaattggtcgaatcgaccctctccgac
tttggagcagtccaagtgcatcagtgtggaggacgagatggatacgctgccgctgaatct
gggcatgatcgcggcgtatgtctgaatactaaatgttcgcagaagatcaatttcgaccaa
tccccattcagatacatcgaccctcacatcaagacaaacctgcagctgcaggctcacctc
ttccgcatccagcaattaagttccacagataggagcaggacaaactgtttcccacggata
atgccgattgacagagttttgcttttgcacgatggcaacgtaacgatctatccgatgtcc
aaggacagtgtggattcgagctggctgggtttgcctccattaggtgcattgctgccgcct
cgatgcgtcagtcgggttgtcccccgaaatgcagctggcggatctgcatcacggatccgg
aacaggttctaa
DBGET
integrated database retrieval system
