Culex quinquefasciatus (southern house mosquito): CpipJ_CPIJ018413
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Entry
CpipJ_CPIJ018413 CDS
T01079
Name
(GenBank) rothmund-thomson syndrome DNA helicase recq4
KO
K10730
ATP-dependent DNA helicase Q4 [EC:
5.6.2.4
]
Organism
cqu
Culex quinquefasciatus (southern house mosquito)
Brite
KEGG Orthology (KO) [BR:
cqu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cqu03032
]
CpipJ_CPIJ018413
03400 DNA repair and recombination proteins [BR:
cqu03400
]
CpipJ_CPIJ018413
Enzymes [BR:
cqu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CpipJ_CPIJ018413
DNA replication proteins [BR:
cqu03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
CpipJ_CPIJ018413
DNA repair and recombination proteins [BR:
cqu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
CpipJ_CPIJ018413
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
DEAD
Drc1-Sld2
ResIII
T6SS_TssG
Motif
Other DBs
NCBI-ProteinID:
EDS27984
UniProt:
B0XH16
LinkDB
All DBs
AA seq
1093 aa
AA seq
DB search
MEDPVFRTKYHKYKYKVKLWEKEFRKKNGRIPSKHDIRDSPAVVRASYKMYYKLKTSLLE
DTLQDALDDDDDFDSSLVSQVESTLSQDCSFTGSFSNLSELRDSNVSISALLTDQIEGKV
TEFVAEEESELNAKAWGKELNRKKTVVEKESKGSNVLVMNKLMMDASTVVPKRNPRKSLS
SRLSSSSFASTSGLNSSSGSSWKDTLPDLETLLNEKSKQVEETSPIQAPTLNQQPKEVVN
QLDQGWLNRQTGQSGQTPSATPQPVRYGLRNITIPPVVESPAIVTPVDTSTSFGMSALSM
SSFVAEAPTSETVTVQNTAYAAPVQSDSDGVVENSEDESVGGVFDALKQFGHANFRAGQE
RAVMRVLCGMSTLVTLSTGSGKSLCYQLPAYLLRKRQNCVTLVISPLVSLMEDQVHGVPN
FLNAQCLHTNQTPKVRERTMAAITAGELDVLLISPEAVVSGEKSTGFGSLLKQLPPIAFA
CIDEAHCVSQWSHNFRPSYLMICRVLKEKLGVKTILGLTATATVQTRVSIVEHLGIPDGT
NGIISDIPLPDNLNLTVSRDANRDAALLHLLQSDRFADLRSIIVYCTRRDECERISGFLR
TCFQDAQRESEAKEGAASKKRKRVNYTAEPYHAGMPSSRRRTIQNAFMSGELRIVVATIA
FGMGINKSDIRAIIHYNMPRNFESYVQEVGRAGRDGKPSHCHVFLDNRGGDRNELRRHIY
ANSIDRHVIRKLLQKIFVPCACANNFKNKEFSEEHRKEIEALKDISWTDDFNDSMGEPST
IAKPKVRQQRTCPGHEVCFSIEATVQQLDIPEENIATLMCYLELHEERYIQVLSRAYTMC
KVSSYAGSRALRTAAKDCPPLAMAIALDLKRGISHDSSTFIEFPVIDVAAAIGWDSGVVK
FQLKNLEWTVENNVRKRSPISVTFSDLGFRLRAPGDLNDDELDKTLDSLFARVTGQEKAQ
LVQLQSISDALSSVAFQTYLAAGGTVGTEGPSQKLKQIVRTYFQSDLDVDVELVPEPDDT
PDTQLLSDIRTMIHRYPENNFSGRAIARVFHGVQSPNYPAVIWGRSNFWRAHTSVDFNRI
VRLANAEIVRMRT
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atggaggatccggtgtttcgcaccaagtatcataagtacaagtacaaagtcaaactgtgg
gagaaggaatttcggaagaagaatggacgaattccttctaagcacgacattcgcgactcc
ccggcggttgtgcgcgcgtcgtacaagatgtactacaagctgaagacgtccctgctggag
gacacgctgcaggacgccctggacgacgatgacgactttgacagctcgctggtgtcccag
gtggaatctacgctgtcccaggactgctccttcacgggcagtttctccaacctgagcgaa
ctgagggattcgaacgtgtcgatcagcgctttgctgacggaccagatcgaggggaaggtt
acggagtttgtggcggaggaggaatcggagctgaacgctaaggcttgggggaaggagctt
aataggaaaaagacggttgtggagaaggagtcgaagggtagcaacgtgttggtcatgaac
aagctgatgatggacgcttcgacagtggttccgaagcggaatccgcgcaagtcgctgtcc
agccgactgtcgagcagctcgtttgcttcgacttctgggttgaacagctcgagcggttcg
agctggaaggacacgctgcccgatttggagacgttgctgaacgaaaagtccaaacaggtc
gaggaaacgtctccaatacaggctccgacgttaaaccagcaacctaaagaggtggtgaac
cagctggatcagggttggttgaaccgtcaaacaggtcaatccggacaaacacccagcgca
actccgcaacctgtccggtacggcctgaggaacatcacgatacctccggtagtggagtcc
ccagcgatcgtaaccccagtcgacacctcgaccagcttcggaatgtccgccctaagcatg
agttcgtttgtggcggaagcgccgacaagcgaaaccgtaacggtgcagaataccgcgtac
gccgcccccgtgcagtccgactcggacggtgtggtggagaatagcgaggacgaatcggtg
ggcggagtgtttgacgcgctgaagcagttcggccacgccaacttccgcgccggccaggaa
cgagccgtgatgcgtgtcctctgcgggatgtccacgctggtcacgctgagcacgggctcc
ggaaagtccctctgctaccaactccccgcatatctcctccggaagcgtcagaactgcgtc
acgctggtcatctctccgcttgtatcgctgatggaggaccaggtgcacggcgtgccgaac
ttcctgaacgcccagtgtctgcacacgaaccagacaccgaaagttcgcgagcgaacgatg
gccgcgattacggccggcgagctggacgtgctgctgatttccccggaggcggtcgtctcg
ggggagaaatccaccgggtttgggtcgctgctgaagcagctgccgccgattgcgttcgcc
tgtatcgatgaggcgcattgcgtgtcccagtggagtcacaacttccggccgagctacctg
atgatctgcagggttcttaaggaaaaactaggggtgaaaacgattcttggactgacggca
acggccaccgtgcaaacaagagtcagcatcgtggagcacctgggcatcccggacggcacg
aacggcatcatcagcgacatcccgctgccggacaatctcaacctgacggtttcacgggac
gcaaaccgggacgcggccctgctgcacctgctccagtccgatcgctttgccgacctgcgc
tcgatcatcgtgtactgcacgcggcgtgacgagtgcgaacggatttcgggatttctgcga
acctgcttccaggacgcccagcgggaaagtgaggccaaagagggggcggcttcgaagaag
cggaagcgggtgaactacacggcggaaccgtaccacgcgggaatgccgtcgtcgcggagg
cggacgatccagaatgcgttcatgagcggggagttgaggatcgtggtggctacgatcgct
ttcggtatgggtatcaacaagtcggacatccgggcgatcattcattacaatatgccgcgg
aactttgagagttacgtgcaggaggtcggtcgtgcgggtcgcgacgggaagccttcgcac
tgtcacgtgtttctggacaaccggggtggcgatcggaacgagctgaggagacatatttac
gcgaactcgatcgatcggcacgtgatccggaagttgctgcagaagatctttgtgccgtgc
gcttgcgcgaacaattttaagaacaaagaattctccgaagaacatcgcaaagagatcgag
gccctgaaggacatcagctggacggatgacttcaacgattcgatgggggaaccctcaacg
atagcaaagccgaaagtcaggcagcagcgaacatgtccaggtcacgaggtgtgcttctca
atcgaggccaccgtgcagcagttggacattccggaggagaacatcgccacgttgatgtgc
tacctagaactgcacgaggaacgctacatccaggtgctgagtcgcgcttacaccatgtgc
aaggtcagttcgtacgccggttccagggcgctgcgaacggccgccaaggattgtcccccg
ttggcgatggccattgcgttggatctaaagcggggcatctcgcacgactcgtccacgttc
atcgagttcccggtcatcgacgtggcagccgccatcgggtgggacagcggagtcgtcaag
ttccagctgaagaacctggagtggactgttgaaaacaacgtccgcaaacgctccccaatc
agcgtaaccttctccgatctgggattccgtctgcgagcacccggcgatctcaacgacgac
gagctggacaaaacgctggattcgctgttcgctcgcgtgacaggccaggaaaaggcccaa
ctcgtacagcttcagagcatctcggacgcgctctcttcggtagcgttccaaacgtatctg
gccgctggtggaactgtcggcaccgaaggcccctcccaaaagctgaaacagatcgttcga
acgtacttccagtccgatctggacgtcgacgtggagttggttccggagccggacgacacg
ccagacacgcaactgctcagcgacatccggacgatgatccaccgctatccggagaacaac
tttagtgggcgggcgattgcgcgcgtcttccacggggtgcagagccccaactatccggcc
gtcatctgggggcggagcaacttttggcgcgcccacaccagcgtcgactttaaccggatc
gtgcggctggcgaacgcggagattgtgcggatgcgcacctag
DBGET
integrated database retrieval system
