Culex quinquefasciatus (southern house mosquito): CpipJ_CPIJ019196
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Entry
CpipJ_CPIJ019196 CDS
T01079
Name
(GenBank) DEAD box ATP-dependent RNA helicase
KO
K12835
ATP-dependent RNA helicase DDX42 [EC:
5.6.2.7
]
Organism
cqu
Culex quinquefasciatus (southern house mosquito)
Pathway
cqu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cqu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CpipJ_CPIJ019196
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cqu03041
]
CpipJ_CPIJ019196
Enzymes [BR:
cqu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CpipJ_CPIJ019196
Spliceosome [BR:
cqu03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
CpipJ_CPIJ019196
Complex B
CpipJ_CPIJ019196
Complex C
U2 SnRNP specific factors
CpipJ_CPIJ019196
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
ResIII
Motif
Other DBs
NCBI-ProteinID:
EDS29270
UniProt:
B0XIG6
LinkDB
All DBs
AA seq
538 aa
AA seq
DB search
MSGNRGNFSFSMRRQGQLSASFPNASGGGRPGQQQQQQQQQKSFSLNAVPPPSSLCGRGG
YAPAKGFQQHQQQPASGVSKHGYHTMDAIAAYSNPASQYTLGKRRGKTEDDYFEDEEEPA
PQLDYIPAPGSPSASGSQSNRKGAGEDDDDEDDDDPLDAFMAGIEAQVEREKKTVPAPNV
DPKKGTRGDIDDEDDEESYYRYMEENPHAGLQDGDGSDGELEYDQDGNPIPPPRKRDIDP
LPVIYHSEIDYEKFEKNFYIPHEDIIALASSQTQELRHKLGIKVSGPSHARSPQGVPTAL
SGRDIIGIAKTGSGKTAAFLWPMLVHIMDQKNLGPGDGPIGLILAPTRELSLQIYQEAKK
FGKVYNISVCCCYGGGSKWEQSKALEQGAEIVVATPGRMIDMIKMKATNLRRVTYLVLDE
ADKMFNMGFEKQYTVKNFGKVSFVQEEKWLSGSARRTEPGASLLEEVWLAYLWKRRRRRT
EPSTPGGIKKAATSLSCSGGRISGRIFAEELERGSINGPQPWRLCDRGDCVNEKLYRV
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgagtggaaatcgtggaaattttagcttttccatgcgccgccagggccagctttccgct
tcgtttcccaacgcaagcggcggcggcagacctggccagcaacaacagcagcagcagcag
cagaaaagtttctccctgaatgcggttccgccgccgagttcgctgtgtggccgcggtggg
tacgctccggccaagggcttccaacagcatcagcagcagccggcgagtggggtgtccaag
cacggttaccacacgatggacgcgattgcggcgtactccaatccggcctcgcagtacacg
ctgggcaagcgtcggggaaaaaccgaggacgactactttgaggacgaggaagagccggcc
ccgcagttggactacattccggcgccgggttcgccctcggccagcggttcccaaagcaat
cgaaagggcgccggagaagacgacgacgacgaggacgacgatgatccgctggacgcgttc
atggccggcatcgaggcgcaggtcgagcgggagaagaaaaccgttccggctccgaacgtg
gacccgaagaagggaacgcgcggcgacattgacgacgaggacgatgaggagagttattat
cgctacatggaggagaacccgcacgccggcctccaagacggagacggttccgacggcgag
ctggagtacgaccaggacggcaatccgattcccccgccgcgtaagcgtgacatcgacccg
cttccagtgatttaccactccgagattgactacgaaaagttcgagaagaacttttacatc
ccccacgaggacattatcgcgctggccagcagccaaactcaggagctgcgccacaagctg
ggcatcaaggtcagcggaccttcccacgcccgctccccccagggcgtcccaaccgccctc
tccggccgtgacatcatcggaatcgccaaaacgggcagcggtaaaacggccgccttcctc
tggcccatgctcgtgcacatcatggaccagaagaacctcgggccgggcgacggccccatc
ggcctcattctcgcccccacccgagagctgtccctgcaaatctaccaggaggcgaaaaag
ttcggcaaagtgtacaacatcagcgtgtgctgctgctacggcggcggctcaaaatgggag
cagagcaaggcgctggaacagggcgcggaaattgtggtggccactcccggccggatgatc
gatatgatcaagatgaaggcgaccaatctgagacgtgtgacctacctggtcctcgacgag
gcggacaagatgttcaacatgggttttgagaaacaatacacagtaaagaactttggcaag
gtaagttttgtgcaggaagaaaagtggctctccggttctgcacggagaacggaacccgga
gcatccttgttagaggaagtgtggctcgcgtacttgtggaagaggaggaggaggaggacg
gaaccttcaactcccggcggaattaaaaaagccgccacttccctctcgtgctctggagga
cggatctcgggacggatatttgcggaagagctggaaaggggaagtataaacggaccccaa
ccgtggagattgtgcgaccgtggcgattgtgtgaatgaaaagttgtatcgagtttga
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integrated database retrieval system
