Culex quinquefasciatus (southern house mosquito): CpipJ_CPIJ019403
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Entry
CpipJ_CPIJ019403 CDS
T01079
Name
(GenBank) THO complex subunit 2
KO
K12879
THO complex subunit 2
Organism
cqu
Culex quinquefasciatus (southern house mosquito)
Pathway
cqu03013
Nucleocytoplasmic transport
cqu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cqu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CpipJ_CPIJ019403
09122 Translation
03013 Nucleocytoplasmic transport
CpipJ_CPIJ019403
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cqu03019
]
CpipJ_CPIJ019403
03041 Spliceosome [BR:
cqu03041
]
CpipJ_CPIJ019403
Messenger RNA biogenesis [BR:
cqu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
CpipJ_CPIJ019403
Spliceosome [BR:
cqu03041
]
Complex C
Other components
EJC/TREX
CpipJ_CPIJ019403
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
CpipJ_CPIJ019403
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-ProteinID:
EDS30156
VectorBase:
CPIJ019403
UniProt:
B0XJB9
LinkDB
All DBs
AA seq
1535 aa
AA seq
DB search
MSLKHCKSLLKDDPATSPLFAKGDRKTGVSRAVYDLIAHGIRGQIKKESVLSMLGELVNL
HSDIPSILLDIFGILDAETAGGGGGGTAGGGSGGGTAGGGSSNGGGSGEGSSEERTVFCY
IVKESERFLSEKLLKERLEIDTLQDVGTIKNRSFYTKFIKVKTKLYYKQRRFNLFREESE
GYAKLITELNQEFAESVSVLNVLEIIKSLIGCFNLDPNRVLDIILESFEQRPEHDKIFIP
LLQAYINDGTIICEVLGYKYRHFADVKTPESLFKVTALLLQHGVIKLDDIYAWLSPTDKL
IVGEWESEVSDAKEFVRKLNVVSTNKDKEQEPEPQKEMTPERYATNQKWGLCEALLHVGD
WNTAQLLLKKLPEQSVMVNEPIARAMCRLLHMIIEPVYRLKCALPCNIKGRPISNGLSKL
APAPVTTIAKLRNHAFPMFIALGPSLHYDSVLLYKLLRLVRTILTEMNVDPSNPPATGAE
NELLYYDIISILDAAILPSLSYMDCNCCVAEEIWSIVKLYPYQFRYSLYARWKNDTFQLQ
PKLIRRRGNAQKQIKALMKRVSKENSKPVGRLIGKLSHCSPGFLFDYILLQIQIYDNLIT
PVVDSLKYLTSLSYDVLGYCLIESLEQVDRNPMQNDGTSFSMWLQSLANFCGAIYKKYNI
ELSGLLQYVANQLKSHKSLDLLILKEVVQKMTGIEAAEEMTAEQIGAMCGGELLRGEAGY
FSQVRNTKKSSQRLKEALASNDLSVALCLLIAQQKHCVIYRETASSHLKLVGKLYDQCQD
TLVQFGTFLGSTYSVEEYVERLPTIHSMLQEYHIHSDVAFFLARPMFSHAISQKYDQLRK
ADQNSKKLSTSQKMVKYLEATSFVMNPVIESVRPLHPPKVWEDISPQFLVTFWSLSMYDL
QVPADSYQREVNKLKQLSLAAMDSKEQNASKNKKEQERYVALMEKLQDERKKQQEHVDKI
MHRLTSEKDSWFLSRSAKSAKNETITQFLQLCLFPRCTFTALDALYCAKFVHTIHSLKTA
NFSTLLCYDRIFCDITYSVTSCTENEATRYGRFLCAMLETVMRWHADQTTFNRECSNYPG
FVTKFRVSNQFSEANDHVNYENYRHVCHKWHYKITKAMVFCLDSKDYMQIRNSLIILMRI
LPHFPVLAKLAQIIEKKVEKVREDEKNKRQDLFVLASSYIGQLKAKSGQMMRESDFHQVA
EKPVKVESQDSKAMNGDSKGERKEIKIEKKIIVTTTNSSSSKPQPSSTTVNNGNSTSSTT
SKSNSSSNNDDVKIVLETREIKKETPLRESVRESSSGGGGGSGSKEKSSKEIKREERARE
KEREREEAAAERKREKEKEKRREKSTKAALQAAAAAEYELTLQQQQQQHERESRASERDR
ERDRSERDLSSVSNSSNEQQSQSQQQHRRSSQDPPEHDREIKRRKVESSSSKSKHVLEDG
SSTATLQSTTSSSSESKKERSSKTKDKRDRTEEEKELRKERKLRGKRDRAEEIMLAEKRR
REEEKAAKLHLLNGEDDLTPSHRDKHHHLRMGFNQ
NT seq
4608 nt
NT seq
+upstream
nt +downstream
nt
atgagcttgaagcactgcaagtcactgctgaaggatgatccggccaccagtccgctgttc
gccaagggtgaccgcaagacgggtgtttcccgggccgtgtacgacttgattgcgcacggc
atccgcggccagatcaagaaggagagcgtcctgtcgatgctgggcgagctggtcaacctg
cacagtgacattccgtcgattctgctggacattttcggcattttggacgccgagacggct
gggggaggcggaggaggaaccgccggtgggggaagtggtggtggaacggctgggggagga
agtagcaatggtgggggttccggggaggggtccagtgaggagcggaccgtgttctgttac
atcgtgaaggagtccgagcggttcctgtcggagaagctgctgaaggagcggctggagatc
gacacgctgcaggacgtcgggacgatcaagaatcgcagcttttacacaaagtttatcaaa
gtgaagacgaagctttactacaaacagcgccgcttcaatctgttccgggaggagagcgaa
ggatacgccaagctgatcaccgagctgaaccaggagtttgccgagtcggtgtcggtgctg
aacgtgctggaaattatcaaatcgctgatcggttgcttcaacctcgatccgaaccgcgtg
ctggacatcatcctggagtcgttcgagcaacgtcccgagcacgacaagatcttcattccg
ctgctgcaggcttacattaacgatgggacgatcatttgtgaggtgttggggtacaagtac
cggcactttgcggacgtcaagacgcccgagtcgctgtttaaggtgacggcgttgttgctg
cagcatggcgtcatcaagctggacgacatttacgcgtggttgagtccgacggacaagctg
attgttggggagtgggagtcggaggtgtcggacgcgaaggagtttgtgcggaagttgaac
gtggtgtcgacgaacaaggacaaggagcaggaaccggaaccgcagaaggagatgacgccg
gaacggtacgcgaccaatcagaagtggggtttgtgcgaggcgttgctgcatgtcggcgat
tggaacacggctcagctgctgttgaagaagctgcccgagcagtcggttatggtgaatgag
ccgatcgcgagggccatgtgccgactgttgcacatgatcatcgagccggtgtaccggttg
aagtgcgctctgccgtgcaacatcaagggacgaccaattagtaacgggttgagcaagttg
gcgccagcgccggtcacgacgatcgccaagctacgcaaccacgcattcccgatgttcatc
gcgttgggaccgtctctgcattacgactcggttttgctgtacaaactgcttcgtttggtg
cgtaccatcctgacggagatgaacgtcgatccgtcgaatccgccggcaacgggtgcggag
aacgaactgctttactacgacatcatctcgatattggacgcggccattctgccgtcgctc
tcgtacatggactgcaactgttgcgtggcggaggagatctggtcgattgtgaagctgtac
ccgtaccagtttcggtacagtttgtacgcgcgctggaagaacgacacgttccagctgcag
ccgaagctgattcgacgtcgcggcaatgcgcaaaagcagatcaaggcgttgatgaagcgt
gtcagcaaggagaacagcaagccggtggggaggttgatcggcaagttgagtcactgctcg
ccgggattcctgttcgactacattctgctgcagatccagatctacgacaatctgatcacg
ccggtcgttgactcgttgaagtatctcacctcgctgtcgtacgacgtgctcgggtattgt
ttgattgagtcactcgagcaggtcgatcgcaacccgatgcagaacgacgggacttcgttt
tcgatgtggctgcagagtttggccaacttttgcggggcgatctacaagaagtacaacatc
gagttgagcggactgctgcagtacgtggcgaatcagctcaagtcgcacaagagtttggac
ttgctgattctgaaggaggtcgtgcagaagatgacgggaattgaagcggctgaggagatg
acggcggagcagattggggcgatgtgcggtggggagttgctgcggggtgaggccgggtac
tttagccaggtgcgcaacacgaagaagtcgtcgcagcggttgaaggaggcgctggcgagt
aatgatttgtcggtggcgctgtgtttgttgattgcgcagcagaagcactgcgtgatttat
cgggagacggcatcgagtcacctgaagttggtcgggaagctgtacgatcagtgccaggac
acgctggtccagtttgggacgttcctggggtcgacgtattcggtggaggagtacgttgaa
cggttaccgacgatccatagtatgctgcaggagtaccacattcactcggacgtggcgttc
tttttggcgcggccgatgttttcacacgcgatcagtcaaaagtacgaccagctgcgcaag
gcagaccaaaactcgaagaagctgtcgacctcgcagaagatggtcaaatatctggaagcg
acgtcgttcgtgatgaatccggtaatcgagtcggttcgcccgctgcatccgcccaaagtc
tgggaggacatcagcccgcagttcctggttacgttctggtcgctgtcgatgtacgacctg
caggttccggccgacagctaccagcgcgaggtcaacaagctgaagcagctgtcgcttgcg
gcgatggattcgaaagagcaaaacgcgtccaagaacaagaaggaacaggagcgttacgtc
gcgttgatggagaagctgcaggacgagcgcaagaagcagcaggaacacgtcgacaagatc
atgcacagactgacgagcgagaaggactcgtggttcctgtcgcgatcggccaaatccgcc
aaaaacgaaaccattacgcagttcctgcagctgtgtctctttccgcgttgtaccttcacc
gccctggacgcgctgtactgtgccaagtttgtccacaccatccacagcttgaagacggcc
aactttagcacgctgctgtgctacgatcggatcttctgtgacatcacctactcggtcacg
tcctgcacggagaacgaagcgacgcgctatggccgcttcctgtgcgccatgctcgagacg
gtcatgcgttggcacgccgaccagacgaccttcaaccgcgagtgctccaactatccgggc
ttcgtgaccaagttccgtgtcagcaatcagttctccgaggcgaacgatcacgtcaactac
gaaaactaccgccacgtttgccacaagtggcactacaaaatcaccaaggccatggtgttc
tgcctcgactcgaaggactacatgcagatccgcaactcgcttatcatcctgatgcgcatc
ctgccgcacttccccgtccttgccaaactcgcccagatcatcgagaagaaggtcgaaaag
gtacgcgaagacgagaaaaacaagcggcaggatctgttcgtgcttgcctcgagctacatc
ggccaactcaaggccaaatccggccagatgatgcgcgagagcgacttccatcaggttgcc
gagaagccggtcaaggtcgagtcgcaagactcgaaggccatgaacggcgacagcaagggt
gagcgcaaggagatcaagatcgagaagaagatcatcgtcacgacgaccaactcgagcagc
agcaaaccccaaccgagttccaccaccgtcaacaacggcaactcgacaagttccaccacc
agcaagagtaacagcagcagcaacaacgacgacgtcaagattgtgctggagacgcgcgag
atcaagaaggaaacgccgctgcgggaatcggtgcgggagtccagtagtggaggtggcggc
ggaagtggttcgaaggagaagtcgtccaaggagattaaacgggaggagagggcgagagag
aaggagcgtgagagggaggaagcggcggcggagcggaagcgagaaaaggagaaggaaaag
cggagggagaagagcacgaaagccgctctacaagcggccgccgcggccgagtacgagctg
acgctccagcaacagcagcagcagcacgagcgggaatcacgggccagcgagcgcgaccgg
gagcgtgatcgcagcgagcgggacctcagctcggtgtccaactcgagcaacgagcagcag
tcgcagtcgcagcagcagcaccggcgcagcagccaggacccgccggaacatgaccgagaa
atcaaacgtcgcaaagtggaaagctccagctccaagagcaaacacgtcctcgaggacggc
agttccacggccacgctccagtcgaccacctcgtcgtcgtccgagtccaagaaggagcgc
agcagcaagaccaaggacaagcgcgaccgcaccgaggaggaaaaggaactccgcaaggag
cgcaaacttcgcgggaagagggatcgtgccgaggagattatgctggcggagaagcgccgc
cgcgaggaggaaaaagccgccaaattgcatctgctgaacggggaggacgacctgacgccg
tcccatcgtgacaagcaccaccatctgcggatgggattcaaccaatag
DBGET
integrated database retrieval system
