Crassaminicella indica: KVH43_01455
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Entry
KVH43_01455 CDS
T08466
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
cras
Crassaminicella indica
Pathway
cras03030
DNA replication
cras03430
Mismatch repair
cras03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cras00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KVH43_01455
03430 Mismatch repair
KVH43_01455
03440 Homologous recombination
KVH43_01455
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cras03032
]
KVH43_01455
03400 DNA repair and recombination proteins [BR:
cras03400
]
KVH43_01455
Enzymes [BR:
cras01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KVH43_01455
DNA replication proteins [BR:
cras03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KVH43_01455
DNA repair and recombination proteins [BR:
cras03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KVH43_01455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
PHP
DNA_pol3_finger
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
DUF6282
HROB
HHH_3
Motif
Other DBs
NCBI-ProteinID:
QXM06467
LinkDB
All DBs
Position
complement(282890..286384)
Genome browser
AA seq
1164 aa
AA seq
DB search
MEDFVHLHVHTEYSLLDGAVRIKELVKAAKELGMKAIAITDHGSMFGVIDFYKEAKKQGV
KPIIGCEVYTAARSMLDKDPVKDKRQGHLVLLAKNNTGYKNLIKIVSLGYTDGFYYKPRI
DTKVLEKYSEGIIALSACLAGDIQQKLLQNDYEGAKKEALRMKSIFGEGHFYLELQDHGL
KEQKMVNTQLIRLSQETGIPLVATNDIHYLRREDGKIHDILLCIQTGKTIEDEDRLKFPT
NEFYLKSKEEMKELFPYAKEALENTVKIANMCNVTFEFHQMHLPKYHVPQGYSAKEYLRK
LCNEGLKRRYKEITDELLERLQYELTTIENMGYVEYFLIVWDFIRYAKENNIMVGPGRGS
AAGSLVSYTLGITEIDPIKYHLIFERFLNPERVSMPDIDIDFCFERRQEVIDYVVRKYGK
EKVAQIITFGTMAARAAIRDVGRAINMSYAEVDAIAKKIPMQLGISIDKALEIDKQFKEI
YEKEKNAKYLIDAARAVEGMPRHASTHAAGVVIAKEAIDEYVPLYMHNEGITTQFTMTTL
EELGLLKMDFLGLRNLTVIRDAIESIEKNHGVKIDFSNSKYDDPRVYELISKGDTLGVFQ
LESAGMRQFMKELKPDCFEDIVAGISLYRPGPMDSIPKYIEYKNNPEKIEYLHPKLEPIL
NVTYGCLIYQEQVMQVVRELGGYSYGRSDLVRRAMGKKKMEVMEQERQYFIHGKKDEKGN
IEIPGCIRNGVPEEIGNQIYDEMIEFAKYAFNKSHAAAYAVLGYETAYLKAYYPVEFMAA
LITSIMGNAAKVAQYIEDCKKRNIEILPPSVNESRDKFIVQDGKIRFGLLAVKNVGTGVI
DAIVKAREEKGKFLSFTDFCDKVDMKEMNKRAIESLIKAGAFDNLGANRAQLLAIYEKTM
DGIQQDRKRNLEGQVSLFQAFEEIIPENVKRDDLPDIKEFPQKDLLIMEKEVLGLYISGH
PLSEYEREIKEISTMNTGDLLELSENQQEDNRLKDGSYIRIGGLIGHRKNKITKNNNMMA
FITLEDLFGSVEVLVFPKIFDKYINLLYEDSVVIIEGKISMREDEEPKIIAEKILPLMKK
KDGEDFKKENQKLYLKISKGKDVNAVFKKIKPILTSYKGNVPVYLYLEEGNKKLRADKHL
WVSLNDGLIKELNILLGEECVKIC
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
atggaggattttgtacatttacatgtgcatacagagtatagcttattagatggtgcagta
agaattaaagaactcgttaaagcagcaaaagagttagggatgaaagctatagctataact
gatcacggttctatgtttggtgttattgacttttataaagaagcaaaaaagcagggggtt
aaaccaatcataggatgtgaagtgtatacagcggctagaagtatgctggataaagatcca
gtaaaagacaaaaggcagggacatcttgtgcttcttgcaaagaataatacgggctataaa
aatcttataaaaattgtatctttaggatatacagatggtttttattataagcctcgtatt
gatactaaagtccttgaaaagtatagtgaagggattattgcacttagtgcttgtcttgca
ggagatatccaacagaagcttcttcaaaatgattatgaaggagctaaaaaagaagcatta
agaatgaaaagtatatttggagaaggacatttttatttagaacttcaagatcatggctta
aaagagcagaaaatggtaaatacccaattaataagactcagtcaagaaacaggtattcct
ttggttgcaacaaatgatatccattatttaaggcgagaagatggaaagattcatgatata
cttctttgtattcaaacagggaagacaattgaggatgaagatagactaaaatttcctaca
aatgagttttatttaaaatctaaggaagagatgaaagaattgtttccttatgcaaaggaa
gctttagaaaatacagttaagattgcaaatatgtgtaatgtaacatttgaatttcatcag
atgcatttaccaaagtatcatgttcctcaaggttatagtgctaaggaatatttaagaaag
ttatgtaatgaaggactgaaaagacgatataaagaaattactgatgaacttttagaaaga
cttcagtatgaattaacaacaatagaaaatatgggatatgtagagtattttttaatagta
tgggattttataagatatgcaaaagaaaataatattatggtaggtccaggaaggggatca
gcggcaggaagcttagtttcatatacattagggattacagaaattgatcctataaaatat
catcttatttttgagcgttttttaaatcctgaacgtgtaagtatgccagatattgatatt
gacttttgctttgaaagaagacaagaagtgattgattatgtagtcagaaaatatggaaaa
gaaaaagtggcacaaattattacctttggaacaatggctgcaagggctgccatacgagat
gtgggaagggcaattaatatgtcctatgcagaagtagatgctattgcaaaaaaaattccg
atgcagcttggaatttctattgataaagcattagaaattgataagcaatttaaagaaata
tatgaaaaagagaaaaacgcaaaatacttaattgatgctgcaagagctgtagaaggaatg
ccaagacatgcatctactcatgcagctggggttgttatcgctaaagaggccattgatgaa
tatgtacccttgtatatgcacaatgaaggcattacaactcaatttactatgacaacttta
gaagagttgggccttctaaaaatggactttttaggccttagaaatctaacggttataaga
gatgctattgaaagcatagaaaaaaatcatggggtaaaaatagatttttcaaatagcaag
tatgatgaccctcgtgtttatgagcttatcagtaaaggagacacgttaggtgtgtttcag
ttagagagtgcaggtatgaggcagtttatgaaggaattaaagcctgactgttttgaagat
attgtagctggtatttctctttatagaccaggacctatggattctattcctaagtatata
gaatacaaaaacaatccggaaaaaatagaatatttacatccaaagcttgaacctatcctt
aatgtaacttatggatgtttaatataccaagaacaggtaatgcaggtggtaagagagctt
ggaggatattcttatggacgaagcgatttagttcgtcgtgctatgggtaaaaagaaaatg
gaggtaatggagcaggaaagacagtattttattcatgggaaaaaggatgaaaaaggaaat
attgaaattccagggtgtataagaaatggggtaccagaagagattggaaatcaaatttat
gatgaaatgatagaatttgcaaaatatgcctttaataaatctcatgcggcggcatatgca
gtgttaggttatgaaacagcgtatcttaaagcatattaccccgtagaatttatggcagca
ctcattactagtattatgggaaatgctgcaaaagttgcacaatatatagaggattgcaaa
aaaagaaatatagaaatactacctccaagtgtaaatgaaagtcgagataagtttattgta
caggatggaaaaattcgatttggtcttttggcagtgaaaaacgttggaacaggtgttata
gatgcaattgtaaaagcaagagaagaaaaaggcaaatttttaagctttacagatttttgt
gataaagtggacatgaaagaaatgaataaaagagctattgagagccttataaaagcaggt
gcttttgataatttaggagcgaatcgtgcacagcttcttgctatatatgaaaagacgatg
gatgggattcagcaggatagaaaaagaaatctagaaggacaagtatctttatttcaagct
tttgaagagattattcctgagaatgttaaaagagatgatttacctgatataaaagagttt
ccacaaaaagaccttttaatcatggaaaaggaagtcttaggactatatattagtggacat
cctctctcggagtacgaaagagaaatcaaggagatttctactatgaatacaggtgattta
ttagagcttagtgaaaatcaacaagaagataataggctaaaagatggatcttacattcga
ataggaggacttattggacatagaaagaataagataactaaaaacaataatatgatggct
tttataaccttagaggacttgtttggtagtgtagaagtattggtttttcctaaaattttt
gataaatatataaatttattatatgaagatagtgttgtaattatagaagggaaaataagt
atgagagaagatgaagagcctaaaattattgctgaaaaaatacttcctcttatgaagaaa
aaagatggagaggatttcaaaaaagagaatcagaagttatatctaaaaattagtaaaggt
aaagatgtgaacgctgtattcaaaaagatcaaaccaattctaacgagctacaaaggaaat
gtacctgtatatttatatttagaagaaggaaataaaaagctaagagcggataagcattta
tgggtaagcttgaatgatggtttaataaaagaattgaatattttattaggagaagaatgt
gtaaaaatatgctag
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