Crassaminicella indica: KVH43_05340
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Entry
KVH43_05340 CDS
T08466
Name
(GenBank) HD domain-containing protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
cras
Crassaminicella indica
Brite
KEGG Orthology (KO) [BR:
cras00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cras03019
]
KVH43_05340
Messenger RNA biogenesis [BR:
cras03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
KVH43_05340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_anti-codon
HD
TraI_2
DsrD
Motif
Other DBs
NCBI-ProteinID:
QXM07129
LinkDB
All DBs
Position
1130698..1131657
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AA seq
319 aa
AA seq
DB search
MIEEKSIQEFKNGDEIQGFFIVRKVEMKLSANNKNFLDFTLSDKTGEVNGKLWDCQEGQN
KEFPIGSLIKVRGNVTEWKGKLQLKINRIRLANDDDKQNIEDYVQAAPIKAEEMFHEIYE
YVQKIKNKDIKGIVEKVILESKEKLMYYPAAKSLHHAIRSGLMYHILRMLRTGEKLIEVY
KNVNKDLLFAGILLHDIEKLEELDSDELGIAEYSKEGQLLGHISMGMNKISRVGQELGAD
EEIIMLLKHMVLSHHYEPEFGSPKKPMIPEGELLHYIDMIDARMYDMEDHLKNIQPGEFT
DPIWSLDNRRLYKTLLCDE
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgattgaagaaaaaagcatccaggaatttaaaaatggagatgaaatacaaggcttcttt
attgtgagaaaagtagaaatgaaattatctgctaataataaaaattttttagattttaca
ttatcagataagacaggagaggtaaatggtaaattgtgggattgtcaagaagggcagaat
aaagaatttcctataggaagcttgataaaagtacgaggaaatgtaacggaatggaaggga
aagctacaattaaaaatcaatcggattagattagcaaatgatgatgataagcaaaatatt
gaagattatgtgcaagctgcacctataaaggcagaagaaatgtttcatgagatttatgaa
tatgtgcaaaagataaaaaataaggatataaagggaattgtagaaaaagttatattagaa
tcaaaagaaaagctaatgtattatccagcagctaaatcattgcatcatgctatccgttca
ggacttatgtaccacatacttagaatgttgagaactggagaaaaactcattgaagtttat
aaaaatgtgaataaagacctcctttttgcaggaattcttcttcatgatatagaaaagcta
gaagaactagattcagatgaattaggaattgcagaatatagcaaagaaggacaacttctt
gggcatattagtatgggaatgaataaaataagcagagttggacaagaattaggagctgat
gaagaaattattatgctccttaagcatatggtacttagccatcattatgagccggaattt
ggaagtcctaaaaagcctatgattccagaaggagaactcctacattatattgatatgatt
gatgcaaggatgtatgatatggaagaccatttaaaaaatattcaaccgggagaatttaca
gatccaatatggtctttagataatcgaagattatataaaacgttgctttgtgatgaataa
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