Crassaminicella indica: KVH43_12145
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Entry
KVH43_12145 CDS
T08466
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
cras
Crassaminicella indica
Pathway
cras03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cras00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KVH43_12145 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cras03019
]
KVH43_12145 (rny)
Messenger RNA biogenesis [BR:
cras03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
KVH43_12145 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
Tweety
DUF7669
Exonuc_VII_L
DUF1490
Motif
Other DBs
NCBI-ProteinID:
QXM07483
LinkDB
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Position
complement(2542260..2543798)
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AA seq
512 aa
AA seq
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MNSIQIVVSIVTGAIGIGIGYFIRKNIAEGKINNAENRAKEIVLEAERAAETSKKEMLLE
AKEEIHKLRSELDRENRERRNELQRLERRLQQKEETLDRKSENLEKKDEILNKKIKEVAE
KKEQINEICQKQLEELERISGLTSEQAKEQLLNDTRKEIKHEAAMMIKEIEQKAKEDGEK
KAKEIIAYAIQKCAADHVAETTVSVVALPNDEMKGRIIGREGRNIRALETLTGIDLIIDD
TPEAVILSGFDPIRREVARIALEKLIVDGRIHPARIEEMVEKAKKEVNNIMKEEGEQATF
ETGVHSIHPELIKLLGRLKYRTSYGQNVLKHSIEVSHLAGLMAAELGADVKLAKRAGLLH
DIGKAVDHEVEGTHVDIGMDLLKKYKESSEVIHAMSTHHGDYEPQTIEAVLVTAADAMSA
ARPGARRETLETYIKRLQKLEEIANSSEGVEKSFAIQAGREIRIMVKPDEMSDEDIVCLA
REVTKKIESELEYPGQIKVNVIRETRAIEYAK
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
attaattctattcagattgtagtgagtattgtaacaggtgctataggtattggaattgga
tattttataagaaaaaatattgctgagggtaaaataaataatgcagaaaatagggctaag
gaaatagttttagaagcagaaagagctgctgaaacatctaaaaaagagatgttacttgag
gcaaaagaagaaattcataaattaagaagtgagcttgatagggaaaatagggaaagacgt
aatgaattacaaagattagaaagaagattgcagcaaaaggaagaaacattagatagaaaa
tctgaaaatctagaaaagaaagatgaaatccttaacaaaaaaataaaagaagtagcagag
aaaaaagaacaaataaatgaaatttgtcaaaaacagcttgaagaactagaaagaatatca
ggtttaacgtctgaacaagcaaaagaacagcttttaaatgatacacgaaaagaaataaaa
catgaagctgctatgatgattaaagaaattgaacaaaaagcaaaagaagatggagaaaag
aaagcaaaagaaattatcgcttatgcaatacaaaaatgtgcagcagaccatgttgcggaa
acgactgtatctgtagtagctcttccaaatgatgaaatgaagggtaggattataggaaga
gaaggaaggaatataagagcactagaaacattaacgggaatagatttaataattgatgat
acaccagaagcagtaattctctcaggatttgatcctataagaagagaggtagcgagaata
gccttagaaaagcttatagtagatggaagaattcatccagctagaattgaagaaatggta
gaaaaagcaaaaaaagaggtaaataatattatgaaagaagaaggtgaacaagctaccttt
gaaacaggtgttcacagtattcatccagagctaataaaattactaggaagattaaagtat
aggactagctacggtcaaaatgttttaaagcattctatagaagtatctcatttagcaggt
ttaatggctgctgaattaggtgcagatgtaaaattagcaaaaagagcagggcttcttcat
gatattggaaaagctgttgatcatgaagtagaaggaactcatgtggatataggcatggat
ttattgaagaagtataaagaatctagtgaagtaatacatgctatgtcaacccatcatggg
gattatgaaccgcaaacaattgaggcagtattagttacggctgctgatgctatgtctgct
gctagaccaggtgcaagaagagaaactcttgaaacttatataaaaaggttgcaaaagctt
gaagaaatagcaaattcaagtgaaggtgtagaaaaatcatttgctattcaggcaggtcgt
gagataagaattatggtaaagccagatgaaatgtcagatgaagatattgtttgtttagct
cgagaggtaacaaagaagatcgaaagtgaattagagtatcctggccaaattaaagtaaat
gttattcgagaaacaagagcaattgaatatgcaaaataa
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