Crassaminicella indica: KVH43_12265
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Entry
KVH43_12265 CDS
T08466
Name
(GenBank) PolC-type DNA polymerase III
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
cras
Crassaminicella indica
Pathway
cras03030
DNA replication
cras03430
Mismatch repair
cras03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cras00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KVH43_12265
03430 Mismatch repair
KVH43_12265
03440 Homologous recombination
KVH43_12265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cras03032
]
KVH43_12265
03400 DNA repair and recombination proteins [BR:
cras03400
]
KVH43_12265
Enzymes [BR:
cras01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KVH43_12265
DNA replication proteins [BR:
cras03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KVH43_12265
DNA repair and recombination proteins [BR:
cras03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KVH43_12265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
HHH_6
DNA_pol3_a_NII
RNase_H_2
tRNA_anti-codon
DNA_pol3_a_NI
Rv2179c-like
HHH_3
DEDDh_C
Catalase_C
Zn_ribbon_8
Motif
Other DBs
NCBI-ProteinID:
QXM06109
LinkDB
All DBs
Position
complement(2567323..2571597)
Genome browser
AA seq
1424 aa
AA seq
DB search
MDTSLKKIVNDIGLNINIEIDAVVKKVRYYKKNKRLSFVITSNKMIHRAALDDLRMNIKK
NIPFVKDVNFNTLYQNIDLKKNDTLKVYWENIIYALNQSIPSSLAWLSNSKYSLNDDTLF
LEVENSIGIESLKEKKVDIFIKEMIQSELNRNVKVVFKGHKDSQKDHKDSYLKEKEIQTQ
AIVESMLTNQNIVMKKQKEVKNVFSNEEIILGKKFNDNIIVIPSVNEESGIVAIEGEIFD
VEWKTLKNGKSLCVLSVTDYKGSIAVKLFVKKEQVDALSEELKIGKYVKIRGDARYDTFS
REIVIMAKDIIKGQLKARIDKAQKKRVELHVHTQMSAMDGVSSAKNLIKRAKEWGHAAIA
ITDHGVVQAFPEAMDAAKKHDIKVIYGVEGYLVNDGEPIVINSNEKEINQSYVVFDIETT
GLSSKNDKITEIGAVKIRDNKIVDKFNILVNPGIPIPLKIVELTGITDDMVKDQPTIEEV
LPKFLEFIEDAPAVAHNANFDTSFIKQSCSQMGLEFNNPIIDTLPLAKILLPHLKRYKLN
VIAKELNVKLENHHRAVDDAKATANIFIEFLSMLKERGIARLSEINDLYAKSVDVKKLDT
FHVIILVKNYTGLKNLYKIISQSHISYFHKRPRIPKSLLSKMREGLIVGTACEAGELYRA
ILNNKPKREIENIVKYYDYLEIQPIENNQFLIQKGLVKGEEELKEINKEIVTLGERFNKM
VVATGDVHFLDPKDEVYRRILMAGQGFSDADNQAPLYFKTTDEMLEEFKYLGESMAMDVV
VNNPNKISDMIEQIIPIPEETYPPVIEGADEDLKNMCYEKAMRIYGDPLPEIVKTRLDKE
LNSIISNGYAVMYIIAQKLVTKSLEDGYLVGSRGSVGSSFVATMSDITEVNPLPPHYICK
NCKNSEFILDGSIGSGADLPDKKCPKCNEDYEKNGHDIPFEVFLGFEGDKEPDIDLNFAG
EYQPNAHKYTEVLFGEGYVFRAGTIGTIAEKTAYGFVKKYFEERQIPINNREIDRLSRGC
TGVKRTTGQHPGGVMVVPNYKDIFDFSPIQYPANDSSSGVITTHFDYHSISGRILKLDIL
GHDVPTIIRMLQDITGVDPQQIPLDDPETVKIFTSLEPLKIVDNDFKCEVGSLGIPEFGT
KFVRQMLVDTKPTTFAELVRISGLSHGTDVWLNNAQDLVRQNVAPLKEVISTRDDIMNYL
IYKGLPPKASFKIMEKVRKGKGLTPEDEAMMKENNVPQWYIDSCNKIKYMFPKAHAVAYV
MMSFRIAYFKVHYPLAFYATYFTTKASDFDAELVVKGKEIVKNKIKELEELGNNVTQKEK
DLLTVLEVVYEMYCRGFGFLPVDIYKSDSDKFIILEDKLLPPLRALQGVGENAARSICKS
RKNGEFISVEDIRERSKVTKTVIETLKNHGCLNGLPDTNQLSLF
NT seq
4275 nt
NT seq
+upstream
nt +downstream
nt
ttggacacatcattaaagaagattgtaaatgatattgggttaaatataaatatcgaaatc
gatgcagttgtaaaaaaagtcagatattataagaaaaataaaaggttgagctttgttata
acttctaataaaatgattcatcgggcagcattagatgatttaagaatgaatataaaaaaa
aatattccttttgtgaaggatgtaaactttaatactttgtatcaaaatatagatctgaaa
aaaaatgacactttgaaagtatactgggaaaatattatttatgcattaaatcaatcaatt
ccctcttcattagcctggttaagcaattcaaaatacagtttaaatgatgatacattattt
ttagaggttgaaaattcaataggtattgaaagcttaaaagagaaaaaggttgatattttt
ataaaagaaatgattcaatctgagttaaatagaaatgtaaaagtagtttttaaaggacat
aaggattcacagaaggatcataaagatagttatctaaaagaaaaagaaatacaaactcaa
gcgattgttgaaagtatgttgacgaatcaaaatatagtaatgaaaaagcaaaaggaagta
aaaaatgtattctcaaatgaagagatcattttaggcaaaaaatttaatgataatataata
gtgattccaagtgttaatgaagaatctgggattgtagcaattgagggcgagatatttgat
gttgaatggaaaacattaaaaaatggtaaaagcttatgtgttttaagcgtaacagattat
aaaggttctattgctgttaagttatttgttaaaaaggaacaagtagatgctttatctgaa
gaattaaaaataggaaagtatgtaaagatacgtggagatgctcgctatgatactttttct
agagagattgttattatggcaaaggatattataaaaggacaacttaaagcaagaatagat
aaagcgcaaaaaaaacgggtggaattacatgttcatactcaaatgagtgctatggatgga
gtatcttctgcgaaaaacttaattaaaagggctaaagagtggggacatgctgctattgca
ataacagatcatggagtagtacaagcttttccagaagctatggatgcagctaaaaaacat
gatattaaagttatttatggtgtagaagggtatttggttaatgatggagaacctattgta
attaatagtaatgaaaaagaaataaatcaaagttatgtagtatttgatatagagacaaca
gggttatctagcaaaaatgataagataaccgaaataggagcagtaaaaataagagacaat
aaaattgtagacaaatttaatatattagttaatccagggattcctatccctttaaaaatt
gttgagcttacggggataacggatgatatggtaaaagatcaaccaactattgaagaagta
ttgcctaaatttctagaatttattgaagatgctcctgctgttgcacataatgcaaatttt
gatacatcttttataaagcaaagttgtagtcaaatgggattagaatttaataatcctatt
atagatactttgcctttggctaaaattttacttcctcatttaaaaaggtataaattaaat
gtgatagctaaggaattaaatgtaaaattggagaatcatcatagggcagtagatgatgca
aaagccacagcaaatatttttattgaatttttatcgatgcttaaggaaagaggaattgca
agattaagcgagataaatgatctttacgctaaatcagtagacgttaaaaagctagatact
tttcatgtaataatattggtaaaaaattacacagggcttaaaaatctatataaaattatt
tctcaatcgcatatttcttactttcataaaagacctagaattcctaaatcacttctttca
aaaatgagagagggtcttattgtaggtactgcttgtgaggcaggagagttatatagagca
attcttaataataagcctaaaagagaaatagaaaatattgtaaaatactacgattattta
gaaatacaaccaatagaaaataatcagttcttaatacaaaaaggattagtaaagggagaa
gaagaattaaaggaaattaataaggaaattgtgactttgggggaaaggtttaataaaatg
gttgttgcaactggagatgtacattttttagacccaaaagatgaagtttatagaagaata
ttgatggcaggacaaggatttagcgatgcagataatcaagcgcctctatactttaaaaca
acagatgaaatgcttgaggagtttaaatatttaggagaaagtatggctatggatgtagtt
gttaataatcctaataaaatttcagatatgattgaacaaatcatacctattccagaagaa
acttatccacctgttattgagggagcagatgaagatttaaaaaatatgtgctatgaaaaa
gccatgagaatttatggagaccctttaccggaaattgtaaaaacaagattagataaggag
cttaactcgattataagtaatggttatgcggttatgtatattattgcacaaaagcttgtg
acaaaatcattagaggacggatatctggtaggatcaagaggttctgtaggatcttcattt
gtggctactatgagtgatattacggaggttaatcctcttccgcctcattatatctgtaaa
aattgtaaaaactcagaatttatcttagatggttcaattggtagtggagctgatttgcct
gataaaaaatgtccaaaatgtaatgaagactatgaaaagaacggacatgatatacctttt
gaagtatttttaggatttgaaggggataaagaaccagatatagatcttaactttgcaggt
gaatatcaaccgaatgctcataagtatacagaagtattgtttggagaaggctatgtattt
cgtgcaggaactattggtacaatagcagaaaaaactgcttatggctttgtaaaaaagtat
tttgaagaaagacaaattccaataaacaatcgagaaatagatagactttcacgtggatgt
acaggtgtaaaaagaactactggacagcatccgggaggtgttatggttgtaccaaattac
aaagatatttttgatttttctcccattcagtatccagcaaatgatagttcatcaggtgtg
attacaactcattttgactatcattctatcagtggtaggatattaaagcttgatatttta
ggacacgatgttcctacgattattagaatgttacaagatattacgggggtagatccacaa
caaattccattagatgatccagaaacagtcaagatttttacaagtcttgaacctttaaaa
attgtagataatgactttaaatgtgaggtaggtagtttagggatacctgaatttggaact
aaatttgtacgacagatgttagtagatacaaagcctactacatttgctgagctagttcgt
attagtggactgtctcatggtacagatgtttggttaaataatgcacaggatttagttaga
caaaatgttgctcctttaaaggaagtaatttctactagagatgatattatgaattattta
atttataaaggattacctcctaaagcttcttttaaaataatggaaaaagtaagaaaagga
aagggattaacacctgaagatgaagcaatgatgaaggaaaacaatgttcctcagtggtat
attgattcttgtaataagattaagtatatgtttcctaaggcacatgctgttgcatatgtt
atgatgtcttttagaattgcttattttaaagtacattatcctttagctttttatgctact
tattttactacaaaagcttcagactttgatgcggagttagtggttaaagggaaggaaata
gttaagaataaaataaaagaattagaagaattggggaataatgtaacgcaaaaagagaag
gaccttttaactgttctagaagtggtttatgaaatgtattgtagaggttttggattttta
ccagtagacatttataagtctgattcagataaatttattattttagaagataagcttttg
ccaccacttagagcattacaaggagtaggtgaaaatgctgcaaggagcatttgcaaaagc
agaaagaacggtgagtttatatctgttgaggatataagagaacggtcaaaagttacaaaa
actgttatcgaaactttaaaaaatcatggctgtttaaatggattgcctgataccaaccaa
ctatcactattttag
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