Capsella rubella (pink shepherd's-purse): 111830077
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Entry
111830077 CDS
T02984
Name
(RefSeq) uncharacterized protein LOC111830077 isoform X1
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crb03019
]
111830077
03041 Spliceosome [BR:
crb03041
]
111830077
03036 Chromosome and associated proteins [BR:
crb03036
]
111830077
Enzymes [BR:
crb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
111830077
Messenger RNA biogenesis [BR:
crb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
111830077
mRNA cycle factors
Common to processing body (P body) and stress granule
111830077
Spliceosome [BR:
crb03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
111830077
Chromosome and associated proteins [BR:
crb03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
111830077
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Motif
Other DBs
NCBI-GeneID:
111830077
NCBI-ProteinID:
XP_023636817
LinkDB
All DBs
Position
Unknown
AA seq
508 aa
AA seq
DB search
MESTTDWLFFTTPPTSYAAMSNSTLKWHANQRRVVHIEGYDSVFHTIHNLRTTSKVEDPD
LASTCKAWHLHLFQRGDHSLYCLSYGGKVDAEPLLRSERCTKDYHLPPDNTPDDSTPPRP
RGHLVLVKKKRDDLPRETQKSSSGVCIKKFLSNYGFNIGKEIYFLGTWGKHVSGCGNWGI
IVQLRELERGVNIFVATPGRLNDLLERARVSMQMIKFLALDETDRMLDMGFEPQIRKIVE
QMDMPPRGVRQTMLFSATFPREIQRLAADFMSNYIFLAVGSVGSSTDLIAQRVEFVQESD
KRIHLMDLLHAQRETQDKLVRGKEMCITTVNPCITTVDYIRGEGLLSNGGNSIGTIVSKI
KGGCCNWCLVVQVDTENTGYLHDKLTSNQKASSSDTETVMSNYAFHVDDFEEILKYCWGK
QLVGRERYFHGSGKNVRGKDPCITTVDYIRAEGLLGNGGNAIGTIVSDFKGGCGNWCMVV
QVCWYMLAFVLCFVEYFFGLRPLAYAIF
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atggaatcaactactgattggctatttttcaccactccaccaactagttacgcggcaatg
agcaactcaaccttgaagtggcacgcaaatcagcggagagtggtacacattgaaggttac
gattctgtttttcatactattcacaacctcagaactacttccaaagttgaagatcctgat
ttggcgtcgacgtgtaaggcatggcatctgcatctatttcaacgtggagaccactctctg
tattgcctttcatatggcggaaaagtagatgccgaaccattgcttcgtagtgagagatgc
acgaaagattaccatcttcctccagataacactcctgatgattctactccaccacgacct
cgaggccatctcgttcttgtaaagaaaaaaagagatgatttgccaagggaaacccaaaaa
agctcttcgggtgtttgtattaagaagttcttgagtaactacggctttaacattggaaag
gaaatatatttcctaggaacatggggtaaacatgtgagcggatgtggcaattggggtata
attgttcagctcagggaacttgagaggggagttaatatctttgttgcaactcctggccgg
ttaaatgatttgctagagagagctagagtctccatgcagatgattaaattcttagctctt
gatgagacagacaggatgctggacatgggttttgaaccacaaatcagaaagattgttgaa
caaatggacatgcctccacgtggagtgagacagacaatgttgttcagtgctacatttcca
agggagatccagagacttgcagctgatttcatgtcaaactatatatttttggctgtggga
agtgtgggttcaagcactgatttaattgcccaaagggttgagtttgtccaggagtctgac
aagagaatccatctcatggacttgcttcacgcgcagagagagacccaagacaagcttgtg
agagggaaggagatgtgtattactactgtgaacccgtgtatcacaactgtggattacatt
cgaggtgaaggtttgctgagtaatggtgggaattctattggtaccatagtaagcaagatt
aaggggggatgttgcaattggtgtttggtcgttcaggttgacacggagaatactggatat
ttgcatgataaacttacctctaatcaaaaagcaagttcttcagatacagagaccgtcatg
agtaactacgcctttcatgtagatgattttgaagaaatattgaagtattgctggggtaaa
caacttgtgggaagggaacgatatttccatggcagcggtaaaaatgtgagaggaaaggac
ccgtgtataactactgtggattacattcgagctgaaggtttgctgggtaatggtgggaat
gctattggtacaatagtgagcgattttaaggggggatgtggcaattggtgtatggtggtt
caggtatgttggtatatgttggcttttgttctgtgttttgtagagtatttttttgggtta
cggccacttgcttatgctatcttctga
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