KEGG   Capsella rubella (pink shepherd's-purse): 111830558
Entry
111830558         CDS       T02984                                 
Name
(RefSeq) splicing factor U2af small subunit B isoform X1
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
crb  Capsella rubella (pink shepherd's-purse)
Pathway
crb03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:crb00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    111830558
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:crb03041]
    111830558
Spliceosome [BR:crb03041]
 Complex A
  U2 snRNP components
   U2 related factors
    111830558
 Complex B
    111830558
SSDB
Motif
Pfam: zf-CCCH RRM_1 zf_CCCH_4 zf-CCCH_4 Torus DUF3245
Other DBs
NCBI-GeneID: 111830558
NCBI-ProteinID: XP_023638739
LinkDB
Position
Unknown
AA seq 339 aa
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP
GVDVHGNPIDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLSDHMVGNVYVQFREEE
QAGYALRNLQGRFYAGRPIIVDFSPVTDFREATCRQYEEDTCKRGGYCNFMHLKSISRGL
RRQLYGRYKNRHSHSRSRSPYRHRSHEDRSHERRSRSRRHEDDDDDSESRTRSRRHRSNS
PHHRRGRRSTSRSRSPGGRRQRSPVREGSEERRAKIEQWNREKEEQENAINRGNENCSDG
HMKKEDYHQEGPCNKKAVDTTKYIWSVQIFLPIHLVNVI
NT seq 1020 nt   +upstreamnt  +downstreamnt
atggcggagcacttagcatctatattcggaacagagaaggatcgagtgaattgtcctttc
tacttcaaaatcggcgcttgccgtcacggtgatcgatgctcgcgtctccacaccaagcca
agcatcagccctacgcttctcctttcgaacatgtatcagcgtcccgatatgatcacacct
ggtgttgatgttcatggtaaccctatcgatccccgtaagattcaggaacacttcgaggac
ttttatgaagatctgtttgaggagctgaacaaatatggtgagattgagagtttgaacatc
tgtgacaatctctctgaccatatggttggtaatgtgtatgtgcagtttcgagaagaagag
caagcaggatatgcgcttcgcaatcttcaaggaagattctatgcaggtcgtccaatcatt
gttgacttctctcctgtcactgacttccgtgaagctacttgtcgacagtatgaggaagat
acttgcaaacgtggtggatactgcaactttatgcaccttaaaagcattagcaggggattg
aggaggcagttatatggaagatacaagaacaggcatagtcatagcagaagtaggagccct
tacaggcatcgtagtcatgaagatcgctctcatgaaaggcgtagccgcagtagaaggcac
gaggatgatgatgatgatagtgagagccgtaccaggagtagaagacacaggagcaatagt
cctcaccacagaagaggaaggaggagtacgagcagaagtagaagtcctggtggaaggaga
cagagaagtcctgttagggaagggagtgaggaaagacgtgccaagattgagcaatggaac
agggagaaagaagagcaggaaaatgcaataaacaggggaaatgaaaattgcagtgatggg
cacatgaagaaggaagactatcatcaggagggtccttgcaacaagaaggctgtggatacc
actaagtatatctggtcagtgcaaattttccttccgatacatctcgtcaatgttatatag

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