Capsella rubella (pink shepherd's-purse): 111830580
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Entry
111830580 CDS
T02984
Name
(RefSeq) E3 ubiquitin-protein ligase RDUF1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crb04131
]
111830580
04121 Ubiquitin system [BR:
crb04121
]
111830580
Enzymes [BR:
crb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111830580
Membrane trafficking [BR:
crb04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
111830580
Ubiquitin system [BR:
crb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
111830580
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF1117
Zn_ribbon_19
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-ANAPC11
zf-RING_16
zf-RING_5
zf-RING-like
zf-RING_10
zf-HC5HC2H_2
Motif
Other DBs
NCBI-GeneID:
111830580
NCBI-ProteinID:
XP_023638812
LinkDB
All DBs
Position
Unknown
AA seq
408 aa
AA seq
DB search
MMPNSRSATISPGMEPTTTATTTTTAVTTSYWCYSCTRFISVWEDQDANAGVLCPYCNGG
FIEEIEDSSNNSSVAAIPSATTIQEVRSVEDSHRSVIRRRRSNRRTSFNPVIVLHGGGGG
AGNGERVENEEGDGFTRERRAYEFYYDDGSGSGLRPLPDSVSEILMGSGFERLLEQLSQI
EASGNGIGRSGNPPASKSAIESLPRVEISDCHMKAEANCAVCTEVFEAGIEGREMPCKHI
FHGDCIVPWLSIRNSCPVCRFELPSDPIQRSSEEENAVGMTIWRLPGGGFAVGRFNAAMR
EGERILPVVLTEMDGGGLGSNEGPRRISWVRAHETPEMSRNGGRSGNGGRLRRAVRGMVS
FMRRVRPNRGGSSSSSTTTTHSNLIDLDSDGGESRVMNRSTSLIRRFF
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgatgccaaattctagatcggcgacgatatctccggggatggaaccaaccaccaccgct
acgacgacgacgacggctgttacgacgtcgtattggtgttacagctgtacgcgattcatc
agcgtttgggaagatcaagacgcaaacgctggagtcttatgtccttattgcaacggtgga
ttcatcgaagagatcgaagattcttctaataattcttccgtcgcggcgattccgtcggcg
acgacgattcaggaagttagatcggttgaagatagtcatagatctgtaatcagacgtcgt
agatccaatcgccggacgtcgtttaatccggtaatcgttttacacggaggaggaggagga
gcagggaacggtgagagagttgagaacgaagaaggagatggatttactagagagagacgc
gcttatgagttttattacgatgatggatctggttcaggtctaagacctcttcctgattct
gtatctgagatcttgatgggatctgggtttgagaggttgcttgaacaattgagtcagatc
gaagcctcgggtaacggaatcggtagatctgggaatccaccggcgtcgaaatcggcgatt
gagtctttgcctagagtcgagatctctgattgtcatatgaaagcggaagctaactgcgcc
gtgtgcacggaggttttcgaagcaggtatcgaaggtcgtgaaatgccttgtaaacacatt
tttcacggggattgtatcgttccgtggctctcgattcgaaactcgtgtcctgtttgtaga
ttcgagttgccttcggatccgattcaacggagtagcgaagaagaaaacgccgtggggatg
acgatttggagattaccaggcggtggtttcgctgttgggaggtttaacgcggcgatgaga
gaaggagagaggatattgcctgtggtgttgacggagatggatggtggtggactcggtagt
aacgaaggaccgagacgtatatcgtgggttagagcacatgagacaccggagatgagtaga
aacggtggtcgttctggtaatggaggtagattgagaagagctgtacgaggaatggtttcg
tttatgaggagagtgagaccaaaccgtggtggctcttcttcttcatctactactactact
cattcgaatcttattgatttggatagtgatggtggtgaaagtagagttatgaatcgatcg
acttcgttgattaggagatttttctga
DBGET
integrated database retrieval system
