Capsella rubella (pink shepherd's-purse): 111831110
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Entry
111831110 CDS
T02984
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein PRP4-like protein
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111831110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
crb03041
]
111831110
Spliceosome [BR:
crb03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
111831110
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_SPT8
Beta-prop_EIPR1
NBCH_WD40
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_EML
WD40_MABP1-WDR62_1st
WD40_like
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_DCAF4
WD_LRWD1
Motif
Other DBs
NCBI-GeneID:
111831110
NCBI-ProteinID:
XP_023640419
LinkDB
All DBs
Position
Unknown
AA seq
184 aa
AA seq
DB search
MYCLVKHEHNQQARDNKIKESKIFATLLKGMNGASCGLDSLARVRDLRTGRSILVFQGHI
RPVLSVNFSPNGYHLASGGEDNQCRIWDLRMRKSLYSIPAHANLVSQVKYEPQEGYFLAD
IAADSSCIATVSHDRTIKLWTSSENGEDEDEGKETRERNNGRRSLVSLFIFVPGQNKLYS
RFSD
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atgtattgccttgtcaaacatgaacacaaccaacaagctagagataacaaaatcaaagag
agtaaaatatttgctacactattaaaaggcatgaatggagcttcttgtgggcttgattca
ctcgctcgggttagggatctccgcactggtaggagtattcttgtcttccaaggacacatc
agacctgttctctcagtgaatttctctcctaatggctatcacttggcatctggtggtgag
gataatcaatgccgtatttgggatctaagaatgaggaagtcattgtacagcatcccagct
catgctaacctcgtgtctcaagtgaaatatgaaccacaagaaggctacttcctggccgat
atcgctgcagatagctcatgtattgcaactgtatcacatgaccgcaccatcaagctttgg
acaagcagtgaaaatggtgaagatgaagacgaagggaaagaaacaagggaaagaaacaat
ggacgtagatctttagtttcgcttttcatatttgtgccgggacaaaacaaattgtactcc
aggttcagcgattag
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