Capsella rubella (pink shepherd's-purse): 17874179
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Entry
17874179 CDS
T02984
Name
(RefSeq) exopolygalacturonase clone GBGA483
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb00040
Pentose and glucuronate interconversions
crb01100
Metabolic pathways
Module
crb_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
17874179
Enzymes [BR:
crb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
17874179
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Paralog
GFIT
Motif
Pfam:
Glyco_hydro_28
Motif
Other DBs
NCBI-GeneID:
17874179
NCBI-ProteinID:
XP_006279044
UniProt:
R0ESE6
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All DBs
Position
Unknown
AA seq
343 aa
AA seq
DB search
LVVLVVMATTLANGTPIVDKAKDAAKSVGDKAKDTAAAVEAKAKDTAAAVGAKVPGAKAF
GAAWKAACAAGGTIIVPKGEYLVEALEFKGPCKGPVTMELNGNLKAPAAVKSTKPHSGWV
DFENIADFTLNGNKAIFDGQGALAWKANDCAKTGKCNSLPIVSTFDYGTENLIVENVECG
PGHGISIGSLGRYPNEQPVKGVTVRKCLIKNTDNGVRIKTWPGSPPGVASNILFEDITMD
NVSTPVLIDQEYCPYGHCKAGVPSQVKLSDVTIKNIKGTSATKVAVKLMCSKGVPCTNIA
LSDINLVHNGKEGPAVSACSNIKPVLTGKLVPAACTEVAKPGP
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
cttgtggtgctcgtagttatggcaaccacattagcaaacgggacaccaatagtcgataaa
gcaaaggatgcagctaaatcagttggcgataaagcgaaagatacagctgcagcagttgaa
gctaaagcgaaagatacagcagcagcagttggagccaaagtacccggagccaaggcattt
ggagctgcatggaaagcagcgtgtgcagcaggaggcacaattatagtgccaaaaggtgag
tatttggtcgaggctctagagttcaagggtccatgcaaaggtccagtcactatggaattg
aatggcaatctaaaggctccggctgcagtcaagtctactaaacctcattcgggatgggtt
gatttcgaaaatattgctgatttcactttgaatgggaacaaagctatttttgatggtcaa
ggtgccctcgcctggaaggccaatgactgcgccaaaactggaaaatgcaactctctcccc
atcgtaagcacatttgattatggtactgaaaatctcattgttgagaacgtcgaatgtgga
ccaggacatggtatttccatcggaagtcttggaaggtaccctaacgagcaacccgtgaaa
ggagtcacagtgaggaaatgcctcatcaagaacactgacaatggagttcgcatcaagaca
tggcctggatctccccccggtgttgcctccaacattcttttcgaagatatcacaatggac
aacgttagcactcccgttctcatcgaccaagagtattgtccttatggccactgcaaagct
ggggtaccatctcaagtgaagttgtcggacgtgactatcaagaacattaagggcacatca
gcgacaaaggtggctgtgaaactaatgtgcagcaaaggcgtgccttgcaccaatattgcc
ctctctgacatcaacttggtccacaacggtaaagaaggaccagctgtctcggcatgttct
aacatcaagcctgttctcaccggaaagttggttccggcggcttgcaccgaagtagctaaa
ccgggtccttaa
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