Capsella rubella (pink shepherd's-purse): 17874509
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Entry
17874509 CDS
T02984
Name
(RefSeq) peptidyl-prolyl cis-trans isomerase CYP71
KO
K12736
peptidylprolyl isomerase domain and WD repeat-containing protein 1 [EC:
5.2.1.8
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
crb03041
]
17874509
03110 Chaperones and folding catalysts [BR:
crb03110
]
17874509
Enzymes [BR:
crb01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
17874509
Spliceosome [BR:
crb03041
]
Complex C
Other components
PPlases
17874509
Chaperones and folding catalysts [BR:
crb03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
17874509
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pro_isomerase
Beta-prop_THOC3
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
WD40_Prp19
WD40_CDC20-Fz
WDR55
Beta-prop_WDR3_2nd
Beta-prop_EML
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_IFT140_1st
Beta-prop_Vps41
WD40_Gbeta
Beta-prop_WDR19_2nd
Motif
Other DBs
NCBI-GeneID:
17874509
NCBI-ProteinID:
XP_006279395
UniProt:
R0GM62
LinkDB
All DBs
Position
Unknown
AA seq
632 aa
AA seq
DB search
MEEVSKNGGTESPTKELAVVAVPPSEVEEEEPLVGPGPAPRGKRKRPLQFEQAYLDSLPS
ANMYEKSYMHRDVVTHVAVSAADFFISGSMDGHLKFWKKKGVGIEFAKHFRSHLGPIEGL
AVSIDGLLCCTISNDHAVKIYDVVNYDMMAMIALPYIPGAVEWVYKQGDVKAKLAVSDRN
SSFVHIYDPRSGSNEPIASREIHMNPIKVMKYNPVADTMISGDTKGIIEYWSPTTLQFPE
DEVNFKLKSDTNLFEIAKCKTTISAIEVSPDGRQFSVTSPDRRIRVFWFITGKLRRVYDE
SLEVAQDLQRSDAPLYRLEAIDFGRRMAVEKDLEKTESAPQPNAVFDESSNFLIYATLLG
IKVINLHNNTVARILGKVESNERYLRVALYQGDQGGKKVRKIPAAAANVNESKEPLTDPT
ILCCAFKKHRIYMFSRREPEEPEDASQGRDVFNEKPAADELMAASDIGNSATTLLPENVI
MHTSLGDIYMKLYPEECPKTVENFTTHCRNGYYDNHLFHRVIRGFMVQTGDPLGDGTGGQ
SIWGREFEDEFHKSLRHDRPFTLSMANAGPNTNGSQFFITTVATPWLDNKHTVFGRVVKG
MDVVQGIEKVKTDKNDRPYQDVKIVNVTVPKS
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagtatcgaagaacggtggcacggagagtccgactaaagaactggcggtggtt
gcagtgccgccgtcggaagtggaggaggaggagccgttggtcggacctggacctgctcca
cgaggaaaacgcaagcgtccgcttcagttcgagcaagcttatcttgattcgcttccttct
gctaatatgtatgagaaaagttatatgcatcgcgatgtagttacacatgttgctgtttca
gctgctgatttctttataagtggaagcatggatggtcacttgaaattttggaagaaaaag
ggagttggtatcgagtttgctaagcatttccgctcccatcttggtccaattgaaggtcta
gcggttagcattgatggtttgctttgctgtacaatctcaaatgatcatgctgttaaaata
tatgatgttgtcaactacgacatgatggctatgattgctttgccatatattcctggtgct
gttgagtgggtctacaagcaaggggatgtcaaagccaaacttgctgttagtgaccgaaac
tcatcgtttgtgcacatttatgatccccgttctggttccaacgaacccattgcttctaga
gagatacatatgaatccaattaaggtcatgaagtataatcctgttgcggacacaatgatc
tctggtgacacaaagggaatcattgagtactggagtccaacgacattgcagtttccggag
gatgaggtaaactttaaactgaagagtgatacgaatctctttgagattgcaaagtgcaaa
acaacaatctctgccattgaggtgagtccagatggtaggcaattttccgttacgtctcct
gatcgtaggattcgcgtgttctggtttataactggtaaactgaggcgggtatatgatgag
tcacttgaggtggcccaagatctgcagaggagtgatgcaccattatacaggcttgaagca
attgactttggtagaagaatggcagttgagaaagaccttgaaaaaactgagagcgctccc
cagcccaatgctgtttttgatgaaagctctaatttccttatatacgccactcttcttgga
ataaaagttataaatttacacaacaacacagttgcaaggatccttggaaaggtggagagt
aatgaaaggtatctgagagttgcattatatcaaggtgatcaaggaggcaagaaagttagg
aagattccagcagctgcggcaaatgtaaatgaaagcaaggagcctttgaccgatccgact
atcctatgctgtgccttcaagaaacacaggatctatatgttcagtcggagagagccagaa
gaacctgaagatgcaagccaagggagagatgtgttcaacgagaagcctgctgctgatgaa
cttatggctgcctcagatattggaaactcagccacaacattgcttccagagaatgtgatc
atgcatacttctttgggtgacatttacatgaagctttacccagaagaatgtcccaaaact
gtggagaatttcacaacacactgtcgaaatggctattacgataaccaccttttccaccgg
gttatcagaggatttatggttcagactggagatcctcttggggatggtactggaggacag
tctatatggggcagagaatttgaagacgagtttcacaaaagtctacggcatgacagacct
ttcacattgtctatggcaaatgctggcccaaacacaaatgggtctcaattctttatcaca
acggtggctacaccgtggctagacaataagcacactgtttttggaagagttgtgaaggga
atggacgtcgttcagggtatagagaaagtgaagactgacaagaacgacaggccttaccaa
gatgttaagatagttaacgtcactgttcctaaatcttag
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