Capsella rubella (pink shepherd's-purse): 17874612
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Entry
17874612 CDS
T02984
Name
(RefSeq) polygalacturonase
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb00040
Pentose and glucuronate interconversions
crb01100
Metabolic pathways
Module
crb_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
17874612
Enzymes [BR:
crb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
17874612
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_28
ADNP_N
Lipoprotein_17
DUF4135
Motif
Other DBs
NCBI-GeneID:
17874612
NCBI-ProteinID:
XP_006279754
UniProt:
R0EU90
LinkDB
All DBs
Position
Unknown
AA seq
395 aa
AA seq
DB search
MGRVNFGVSAFFVFCLLGLSANAKVFNIGSPPGSDITKALLKTFNEACQFPTKSTVLIPK
GEYKLGEIEMLGPCKAPIRIALQGTLKADGNAVHNQKWVAFRNINGFKLNGGGVFDGEGN
AAWRVNNCHKTEQCKKLPISIRFDYITDGKVRGITSLDAKNFHINVIGAKNLTFEEVRII
APAESPNTDGIHVGRSDGIKIINSVITTGDDCVSVGDGMKNLLVERVTCGPGHGISVGSL
GRYGHEQDVKGIKIINCTLQETDNGIRIKTWPSAACSTSASDIHFENIVLKNVTNPILID
QEYCPWNHCNKAKPSTIKLSNISFKNIRGTSGNKDAVKLLCSKGFPCQNVELGNIDIKYT
GADGPATFQCANVSPKIMGTQVPKACSSPVTKPPQ
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgtgtaaattttggagtatccgcattctttgttttttgtttgttaggtttatca
gctaatgcaaaggtattcaacattggctctccaccaggttctgatatcactaaggcattg
ttgaaaacattcaatgaggcatgccaattcccaaccaagagcactgttctgatcccaaaa
ggtgaatacaaacttggtgaaatcgagatgttaggtccatgcaaagctcccataaggatt
gctcttcaaggtaccctgaaagctgacgggaacgcggtccataaccagaaatgggtcgct
ttccgcaacattaatgggtttaaattgaacggtggtggtgtcttcgacggtgaaggtaat
gcagcttggagggtcaataactgccacaagactgaacagtgcaagaaactccccatcagt
atccgttttgattacatcaccgacgggaaggttagaggaataacatccttagatgcaaag
aacttccacattaacgtgattggtgcaaagaacttgacattcgaagaggtcaggatcata
gctcctgcagagagtcccaacactgacggtatccacgttggaagaagtgatggaatcaag
atcatcaattcagtcattactacaggagatgactgtgtctcagttggagacggcatgaag
aaccttcttgtcgaaagagttacttgcggtccaggacatggaatcagtgtcggaagtctc
ggaaggtacggacacgagcaagatgtcaagggcatcaagatcattaactgtaccctccaa
gagactgacaatggtataaggatcaagacatggccttctgcagcttgcagcacaagtgcc
tccgatatccatttcgaaaacattgtcctcaagaacgttaccaaccctatcctcattgac
caagagtactgcccatggaaccactgcaacaaggcgaaaccatcaacgatcaagctttcc
aacataagcttcaagaacattagaggaacatcagggaacaaagacgcagtgaagcttttg
tgcagcaaaggattcccttgtcagaacgttgaactcggtaacattgacatcaaatacacc
ggagctgacggtccagcaacattccaatgcgcaaacgtgtctcccaagataatgggaact
caggttccaaaagcttgtagcagcccagtgacaaagccaccacagtag
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