Capsella rubella (pink shepherd's-purse): 17874692
Help
Entry
17874692 CDS
T02984
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit C
KO
K07466
replication factor A1
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb03030
DNA replication
crb03420
Nucleotide excision repair
crb03430
Mismatch repair
crb03440
Homologous recombination
crb03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
17874692
03420 Nucleotide excision repair
17874692
03430 Mismatch repair
17874692
03440 Homologous recombination
17874692
03460 Fanconi anemia pathway
17874692
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
crb03000
]
17874692
03032 DNA replication proteins [BR:
crb03032
]
17874692
03400 DNA repair and recombination proteins [BR:
crb03400
]
17874692
Transcription factors [BR:
crb03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
17874692
DNA replication proteins [BR:
crb03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
17874692
DNA repair and recombination proteins [BR:
crb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
17874692
MMR (mismatch excision repair)
17874692
DSBR (double strand breaks repair)
HR (homologous recombination)
17874692
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
Rep-A_N
REPA_OB_2
tRNA_anti-codon
DUF223
zf-CCHC
RADX
BRCA-2_OB1
Fer4_9
DUF5123
CDC24_OB3
BBS2_hp
RHH_9
Fer4_10
Motif
Other DBs
NCBI-GeneID:
17874692
NCBI-ProteinID:
XP_023636256
LinkDB
All DBs
Position
Unknown
AA seq
864 aa
AA seq
DB search
MAVDLTTGAINKMLNGEVASEADMTPVLQVTELKLIQSKRPNQEAINRYKVSLSDGILSQ
QGMLGTSLNVLVTSGNIQLGSILRVTQFVCNLIQNRRIVIISNLEIIVEKCNIIGGTHVQ
AGMPNEPGQQLGGGAGYVNTQSNGGYEQQQARRTDLNGGRYGVSANSPQPQVVVHNSSDA
GRYGVSANLPQPQVVHNNPDAGRYGVSANLPQPRVVHNTSDAGRYGVPATSPQPQVSQRY
GTGSGYPETSPSIRPYGSAIAGYGGSGLEQARAPATTAYSRPVQSAYQPQSPPMYVNRGP
VARNEAPPRITPVAALNPYQGRWTIRVRVTCKGELRRFSNPRGEGKLFNFDLLDSDGGEI
RVTCFNDVVDKFFDQIVVGNVYLISRGSLRPAQKNYNHLHNDYEIHLDSASTIQQCQDDA
TIPRYQFHFRNIGDIENMESNSITDLIGIVSSISPTGSIMRKTGTEVQKRALQLKDMSGR
SVELTMWGNFCNAEGQKLQNLCDSGVFPVLAVKAGRISEFNGKQVSTIGSSQFFIEPDFP
EARELKDWYEREGKNAHFTSISREFIGAGRQEVRKVITQIKDEKLGTSEKPDWITVCATI
SFMKVENFCYTACPNMNGDRPCSKKVTNNGDGTWRCEKCDKCVDECDYRYILQIQLQDHT
GLTWATAFQEAGEEIMGISAKDLYYVKYEHQEEEKFEDIIRSVTFSKYIFKLKIKEETYS
DEQRVKATVVRAEKLTYSSDTRFMLEAMDKLRTGDANSLPVKTESSNYRSDAFNSGIGTS
GIGETASVDARREFELPAANQVGQYGNQYSSGARPVSGMISCNACGSNGHVSANCPSLMS
EPQGEYTQGRYTGGGMPRQHVGGY
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggatttgacgacgggagctataaataagatgttaaatggagaagtggcaagt
gaggctgatatgacgccagtgctacaagtgacagagttgaagttgattcagagcaagcgt
ccgaatcaggaagccataaatcgatacaaggtttctttatccgatgggatcctctcgcaa
caaggcatgcttggtacttccttgaacgttctcgtgacttcaggaaatatccaattgggt
tccattttgagagtcactcagttcgtctgtaatctcatccagaatcgaaggattgttatt
atttcgaatttggagattattgtggagaaatgcaatataattggaggaactcatgtacaa
gctgggatgcctaatgaacctggtcaacaacttggtggtggggcgggttatgtaaatact
caaagcaatggtggttatgagcagcaacaagcaagaaggactgatttgaatggtgggagg
tatggtgtatctgctaattcacctcaacctcaagttgttgttcataacagttctgacgct
ggaagatatggtgtatctgctaatttacctcagcctcaagttgttcataacaatcctgat
gctgggagatatggtgtatcggctaatttacctcagcctcgtgttgttcataacacttct
gacgctgggagatatggtgtaccggctacttcacctcagcctcaagttagtcaaagatat
ggtactggttctggttatccggaaacatcaccttccatcagaccatatgggagtgcaatt
gcaggttatggaggatctgggttggagcaagctcgggcacctgcaacaactgcttattcc
cgtccagttcaatcggcttatcagccacaatcaccaccgatgtatgtcaacaggggacct
gtggctaggaacgaagcacccccgaggataactccggttgctgctcttaatccttaccag
ggtcggtggactatcagggtcagggtcacgtgtaagggagaactgaggcgttttagtaat
ccgcgtggggaaggcaaattattcaattttgatctccttgactctgatggtggggaaata
agagtgacttgttttaatgatgtggttgataaattctttgaccagattgtagtgggtaat
gtttatttgatttcaaggggaagtttgagacctgctcagaagaactataatcatcttcac
aatgattatgaaatacatttagactctgcatcgacgatacagcaatgccaggatgatgct
accattccacgctatcagttccatttccgtaacataggtgatattgaaaacatggagagc
aacagcatcactgatctaattggtatcgtttcgtccatcagtccgacaggaagcattatg
cggaaaaccggaactgaggtccagaaaagggcacttcagttaaaggatatgtcaggccga
agtgtcgagcttaccatgtggggtaatttctgcaatgcagaaggacagaaattacaaaat
ctttgtgactctggggtattcccggttcttgctgtgaaggcaggcaggatcagtgaattc
aacgggaagcaagtgagcaccattggatcaagtcaattcttcatagagccagatttccct
gaggccagagaattaaaagactggtatgagagagaaggaaaaaacgctcattttacctcc
atatcgagagagtttattggtgctggcagacaagaagttcgcaaggtaattactcagatc
aaggacgagaagctaggaacctcagagaagccggactggatcacagtctgtgccaccatc
tcattcatgaaggttgaaaatttctgctacacagcttgtcctaatatgaatggagatcgc
ccatgcagcaaaaaagtcactaataatggagatgggacatggcgttgtgagaagtgtgac
aaatgtgtggatgaatgtgactacaggtatatattgcagatccagttacaggaccatact
ggtctaacctgggccacagcattccaggaagctggtgaggagataatgggaatatctgcc
aaagatttgtattatgtgaagtatgaacatcaggaggaggagaaattcgaagacatcatc
cgtagtgttactttctccaagtatatcttcaagctgaagattaaagaagaaacttatagc
gacgagcaacgggttaaagcaactgttgtgagagctgaaaagcttacctattcttcagat
accaggttcatgctagaggcaatggataaactcaggacaggagatgcaaattctctccct
gtaaagacagagagttccaactacaggtctgatgcattcaactccggtattggaacatca
ggaattggagagaccgcatcagtggacgcacgcagagaattcgaattacctgcagcaaac
caagtgggtcaatatggaaatcagtatagtagtggtgcaaggcctgtcagtggtatgatt
agctgtaacgcttgtggtagcaatggccatgtttctgcaaactgcccgagccttatgagc
gagccacaaggagaatacacacagggaagatacacaggaggtggcatgccaaggcaacat
gttggcggctactga
DBGET
integrated database retrieval system
