Capsella rubella (pink shepherd's-purse): 17874769
Help
Entry
17874769 CDS
T02984
Name
(RefSeq) trafficking protein particle complex II-specific subunit 130 homolog
KO
K20307
trafficking protein particle complex subunit 10
Organism
crb
Capsella rubella (pink shepherd's-purse)
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crb04131
]
17874769
Membrane trafficking [BR:
crb04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
17874769
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAPPC10_1st
TRAPPC10
Foie-gras_1
NTS_TR130
bL31_N
TPR_2
Motif
Other DBs
NCBI-GeneID:
17874769
NCBI-ProteinID:
XP_006279901
UniProt:
R0G8C8
LinkDB
All DBs
Position
Unknown
AA seq
1259 aa
AA seq
DB search
MANYLAQFQTIKNSCDRLVAAVEDVSDLWPTVKGLFEEHQPLKRAFLTNKTRNPVFVENL
PVEFILTTDARLRSRFPQEQYLFWFREPYATIVLVTCEDLDEFKNILKPRLKLIVQNDER
EWFIVFVSKAHPSNDQATKSVKKVYAKLEVEFSSKKRERCCKLDVHGPDGTFWEDLELKI
TECIRNTLDRRAQFYEDEIRKLSEQRFMPIWNFCNFFILKESLAFIFEMAHLHEDALREY
DELELCYLETVNMPGKQRDFGGFDSEDDQAALLKPGSKPLTQIVQDDSFREFEFRQYLFA
CQSRLLFKLNRPFEVASRGYSFIISFAKALTLHESILPFCMREVWVITACLALIEATASH
HHDGVVAPDIEKEFYRLQGDLYSLSRVKFMRLGYLIGYGTDIEKSPLNSACLSMLPWPKP
AVWPSLPQDASSEVLEKEKTILQATLRTKHFGIQQKALPLEPSVLLRVANRRRASLSTGN
IPEIFDGRPSFNEGSGLEASPRTPSSLKVQAAPMSRTNSSPGNFESPLDRPMRLAEIFVA
AEHALRLTISDHELLKTLSSIQDFENKYLNLTKGAAENYHRSWWKRHGVVLDGEIAAVCF
KHGKYDLAANSYEKVCALYAGEGWQDLLAEVLPNLAECQKILNDQAGYMSSCVRLLSLDK
GLFSSKERQAFQSEVLTLAHSEMKNPVPLDVSSLITFSGNAGPPLQLCDGDPGNLSVTVW
SGFPDDITLDSLSLTLVATNNTDEGGQALKSSAATVLKPGRNTITFALPPQKPGSYVLGV
VTGQIGRLRFRSHSFSKGGPADSDDFMSYEKPTRPILKVSKPRALVDLAAAVSSALLINE
AQWIGIIVRPIGYSLKGAILHIDTGPGLKIEDSYGIEMERYMDTDCDASASKADVFVEDS
PVSPVRDSEVLNLCDGKIVFSDWASNVSSILWVPVRALSEKLARGSSSVNPLKQDMLEGM
RTVALKLEFGVHHNQIFERTIAAHFTDPFDVTTRVANKCNDGTLVLQVMLHSLVKANLIV
LDAWLDLQDGFVHGQNDGRPTSTFFPLVVSPGSRAAVVFNICLDKTMSSEGKDVQLPESI
LNIKYGIHGDRAAGAHKPVDADHSGTDTEGRDLVFKSAIVLQRPVLDPCLTVGFLPLSSD
GLRVGKLITMQWRVERLKDLKENEAVEQQHDEVLYEVNANSENWMIAGRKRGHVSLSEEQ
GSRVVISILCVPLVAGYVRPPQLGLPNVEEANVSSNPPGPHLVCVLPPLLSSSYCIPVK
NT seq
3780 nt
NT seq
+upstream
nt +downstream
nt
atggctaactacttggctcagttccaaacgattaagaattcctgcgatcgtctcgttgcc
gccgtggaagatgtgtctgatctgtggcctacagtcaaaggtttatttgaagaacatcag
ccattgaaaagagcattcttgacaaacaagactcgaaatccggtttttgttgagaacttg
ccggttgaattcatattaactacagacgcgagacttcgtagtcgattcccacaggagcaa
tatttgttctggtttcgagaaccatatgcaactatagttcttgtgacttgtgaggatctt
gatgagtttaaaaacattctcaaaccacgtctgaaattaattgttcagaatgatgagagg
gaatggtttattgtatttgtatctaaagctcatccaagtaatgatcaagcaactaaatct
gtcaagaaagtatatgcaaagcttgaagttgagttcagttcaaaaaagagagaaaggtgc
tgtaagctggatgtacatggccctgacggaactttttgggaggatctggaattaaagatt
accgagtgcatcaggaataccttggataggcgcgcacaattctacgaagatgagatacgc
aagctcagtgagcagcggtttatgccaatatggaacttttgtaactttttcatcttgaag
gaaagtttggctttcatatttgagatggctcatcttcatgaagatgcattacgtgaatat
gatgaactagagctctgctatttggaaacagttaatatgcctgggaaacagagggatttt
ggaggattcgacagtgaagatgaccaagctgcactgctgaaaccaggaagcaaaccattg
acacagattgtgcaagatgattcttttagagaattcgagtttagacagtatctctttgcc
tgtcagtctaggctgttgttcaaattgaatcgtccctttgaagttgcttccaggggatat
tcttttattattagttttgcgaaggccttaaccctccatgagagtatactgcccttctgt
atgcgcgaagtttgggtaattactgcatgtttagcgttgattgaagcaactgcttctcat
caccatgatggagttgttgcacctgatatcgagaaggaattctaccgtcttcagggtgat
ctctattcgctttcacgggttaagttcatgagactgggatatctgataggatatggaaca
gacatagaaaagagtccactgaacagtgcttgtctcagtatgctgccttggccaaaaccg
gcagtctggccatctcttccacaagatgcttcctctgaggtgcttgaaaaagaaaagact
attcttcaagcaactttaaggaccaagcactttggtattcaacagaaagcattacctctt
gaaccatctgtacttctacgtgtggctaacagaagaagggcttctctttctaccggaaat
attcctgaaatatttgatgggcgtccaagttttaacgaaggatcaggtttagaagcgtct
ccgagaacaccttcatcacttaaagtacaagcagctcccatgtcaagaacgaattcttca
cctggaaattttgagagtccgctagataggcctatgaggcttgctgaaatttttgttgca
gctgagcacgctctgcgacttaccatttcagatcatgaattgttgaagacattgtcatct
attcaggatttcgagaataaatatctcaacctaactaaaggtgctgccgaaaactatcac
cgttcttggtggaagagacatggagttgttcttgatggggaaattgcagctgtctgcttc
aagcacggaaaatatgatttggctgcaaactcttatgaaaaagtttgtgccctctatgcg
ggtgaaggatggcaagatttactggcagaagtcttgcctaatttagctgagtgtcaaaag
attcttaatgatcaagctgggtacatgtcatcttgtgttagactactttcgttggataaa
ggtttattctcgtccaaggagcggcaagcttttcagtccgaggttcttactcttgctcac
agtgaaatgaagaacccagttcccttagatgtgtcatcgttgatcacattttctggaaac
gcgggtcctccacttcagttgtgtgatggagaccctgggaatctatctgttactgtgtgg
agtggctttcctgatgatatcacccttgattcgcttagtcttaccttggtagccaccaac
aacactgacgaaggcggccaggctttaaagagttccgctgcaactgtactaaagcccgga
cgtaatactatcacttttgctttgcctccacaaaaacccggttcctatgtcttgggagta
gttactggccagattgggcgcttgagattcaggtctcacagcttttcaaagggtggtccc
gcagatagtgatgacttcatgagttatgaaaagcctaccagacctatcttgaaggtttcc
aaaccgagagctctggttgatcttgctgcagctgtatcttctgcgctactaataaatgaa
gcccaatggattggtatcatagtacgtcctattgggtactcacttaaaggcgccatcttg
cacattgatactggtccaggtctaaagattgaagactcatatggcattgagatggagaga
tacatggacacagattgtgatgctagcgcatcaaaagctgatgtttttgtagaagatagt
cctgtctctccagtacgggattcagaggtgcttaatctttgcgatggtaaaatagtgttt
tcagattgggcaagcaatgtgagttctattctgtgggtccctgttcgtgcattgagtgag
aagcttgctagagggtcatcttcagtcaatccactgaaacaagatatgttagagggaatg
agaactgtagctttgaaacttgagtttggggttcatcataaccagatatttgagagaacc
atagctgcacattttacggacccttttgatgtgaccacaagggtggcaaacaaatgcaat
gatggcactttggtcttgcaggtcatgctacactccctagtcaaggcaaacttaatagtt
ctcgatgcttggctcgatcttcaagatggatttgttcatggacaaaatgatggaagaccg
acttcaacattctttccgcttgttgtgtctccaggatctagagcagcagtcgtgttcaat
atatgcctagacaagactatgtcatcagaagggaaagatgtgcagctaccagagagcatt
ctgaatatcaaatatggaatccatggggatagagcagctggagcacacaagccagtggat
gcagatcactctggaactgatacggaagggagagatttggtgttcaagagtgccattgtt
ttgcaacgtccagtgcttgatccttgcctcacagttggattcctcccactttcttctgat
ggtcttagggtcggaaaacttatcaccatgcagtggagagtggaaaggcttaaagatctc
aaagaaaatgaagctgtagaacaacaacatgatgaggtgttgtatgaagtcaatgcaaat
tcggagaattggatgatcgctggtaggaaaagaggccatgtctctctctcagaggagcaa
ggttcaagagtagtaatctcgatactgtgtgtcccgttagttgcgggttatgtccgtcct
cctcaactcgggttgccaaacgtagaagaagcaaatgtaagcagcaatccaccgggtcct
cacttggtttgcgtcttgcctccacttctaagttcttcctactgcatccctgtcaagtaa
DBGET
integrated database retrieval system
