Capsella rubella (pink shepherd's-purse): 17874781
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Entry
17874781 CDS
T02984
Name
(RefSeq) DNA topoisomerase 3-alpha
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb03440
Homologous recombination
crb03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
17874781
03460 Fanconi anemia pathway
17874781
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
crb03032
]
17874781
03400 DNA repair and recombination proteins [BR:
crb03400
]
17874781
Enzymes [BR:
crb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
17874781
DNA replication proteins [BR:
crb03032
]
Eukaryotic type
DNA Topoisomerases
17874781
DNA repair and recombination proteins [BR:
crb03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
17874781
FA (Fanconi anemia) pathway
17874781
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Zn_ribbon_GRF
Zn_ribbon_Top1
zf-CCHC
Rpr2
Motif
Other DBs
NCBI-GeneID:
17874781
NCBI-ProteinID:
XP_006279975
UniProt:
R0GNU4
LinkDB
All DBs
Position
Unknown
AA seq
919 aa
AA seq
DB search
MSRRGGGPVTVLNVAEKPSVAKSVAGILSRGSFRTREGRSRYNKIFEFDYAINGQPCRML
MTSVIGHLMELEFSDRYRKWHSCDPADLYQAPVMKHVPEDKRDIKKTLEEEARKSDWLVL
WLDCDREGENIAFEVVDVCRAVKHNLFIRRAHFSALIDREIHEAVQNLRDPNQLFAEAVD
ARQEIDLRIGASFTRFQTMLLRDRFAIDSTGEERSRVISYGPCQFPTLGFIVERYWEIQA
HEPEEFWTINCSHQSEEGIATFNWMRGHLFDYASAVILYEMCVEEPTATVMNVPHPRERF
KYPPYPLNTIELEKRASRYFRLSSEHTMKVAEELYQAGFISYPRTETDAFSSRTDLRAMV
EEQTRHPEWGAYAQRLLEPEGGLWRNPGNGGHDDKAHPPIHPTKFSSGESNWSRDHLNVY
ELVVRHYLACVSQPAVAAETTVEIDISGERFSASGRAILAKNYLEVYRFESWGGSVIPVY
EKGQQFIPTSLTLDSAVTRPPPLLCEADLLSCMDKAGIGTDATMHDHIKKLLDRGYATKD
ANTRFSPTNLGEALVMGYDDMGYELWKPNLRAIMEHDMNEVSVGRKTKAEVLETCLQQMK
ACFLDARVKKSKLLEAMTIFFERSNNTDEGENQTAGEVVRRCNLCNESDMALRKNRDGNF
MVGCMNYPQCRNAVWLPGPTLEASVTTNVCQSCGPGPVYKILFKFRQIGIPPGFEVNHLG
CVGGCDGILKQLIDICGTGSRSQARRAPDTVPPNNIRGSNTRQSNVCIHCQQRGHASSNC
PSRVSASRNSRPTGTNPRNDESTVSCNTCGTQCVLRTANTEANRGRQFFSCPTQGCSFFA
WEDGISNSSGNATTGSNSGGSGRRGNRGRGRGGRGGQSGGRRGSGTSFVSATGEPVSGIR
CFSCGDPSHFANACPNRNS
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgacgaggcggtggccccgtgacggtgttgaacgtggcggagaagccgtccgtg
gcgaagtcagtggcggggattctgtcccgtggaagtttccggactcgagagggtaggtct
cgctacaacaaaatcttcgagttcgattacgccattaatggccagccatgtcgtatgcta
atgacctccgtcatcggtcacctgatggagcttgagttttccgatcgttaccgcaaatgg
cactcctgcgacccggcagatctgtaccaagctccggtcatgaaacacgttcccgaggac
aaaagggacattaagaagacattggaggaggaagcgaggaaaagcgactggcttgtgctt
tggcttgattgtgatagggaaggtgaaaacattgcatttgaagttgttgatgtttgcaga
gctgtcaaacacaatctttttatacggagggctcatttctctgcgttaattgacagggaa
attcacgaagcagttcagaatcttagagatcctaatcaactgtttgctgaggctgttgat
gctagacaagaaatagacctacgcattggtgcttctttcactagatttcagactatgctg
ctgagagataggtttgctattgactccacgggcgaggagaggagtcgtgttataagttat
ggtccttgtcagtttcctacacttggctttattgtagagcgatactgggagatacaggca
catgaaccagaagagttttggacaatcaactgttctcaccaatcagaagaaggcattgct
acctttaattggatgcgtggtcatctcttcgattatgcttcagctgtcatattatatgag
atgtgtgttgaagaacctactgccaccgtaatgaatgttccacatccaagggaaagattc
aaatatcctccttatcctttgaacaccattgaacttgaaaaacgtgcttcaagatacttc
cgcctgagttcagagcacaccatgaaggtggcagaagaattatatcaggctggtttcatc
agctatcctcgtacagagactgatgctttttcgagcaggacagatttacgtgctatggtg
gaggagcaaacaagacatcctgaatggggtgcatatgcacaaagactattagaacctgag
gggggactctggagaaaccctggtaatggtggtcatgatgacaaggctcatccacccatt
cacccaacaaagttttctagcggagagtctaattggagcagagatcaccttaatgtatat
gagctagttgtccgccattacctagcatgtgtttcgcagccagcagttgctgcggaaacc
acagtcgaaattgatatttctggtgagcgcttttctgcatctgggagagcaatattagct
aaaaactaccttgaggtgtaccgctttgagtcttgggggggttcagtgattcccgtgtat
gaaaaagggcagcagtttatcccaacaagtttgactcttgattcagctgtaacgaggcca
ccaccgttattgtgtgaagctgacttactgagttgtatggacaaggcaggcattggcacc
gatgcgacaatgcacgaccacattaagaaactccttgatcggggttatgctacaaaggat
gctaatacacgattttctccaaccaacctgggtgaggcgcttgtgatgggatatgatgac
atggggtatgaactttggaaaccaaatctcagggccatcatggaacatgatatgaatgaa
gttagtgttggtaggaaaactaaagctgaagttcttgaaacatgtttgcagcaaatgaaa
gcttgtttcttggatgcaagagtaaaaaaatcaaagctcctagaagcaatgactattttc
tttgaaagatctaataacactgatgaaggtgaaaatcagacagctggtgaagttgtcaga
cgatgcaatctctgcaatgaatcagatatggcactcaggaagaaccgggatggcaatttc
atggttggatgcatgaattatcctcagtgtcgaaatgcagtctggcttcctggaccaaca
ctggaagcatctgtcactactaatgtttgtcaatcttgtggtccaggcccagtctacaag
atacttttcaagttccggcaaattggaattccaccaggctttgaggttaatcacttaggt
tgtgtcggtggctgtgatggcattcttaaacagttgatagacatatgtggaactgggtcc
cgttctcaagcaaggagagctccagatactgtacctccaaacaatatccgaggaagcaat
acaagacagagtaatgtctgcatacattgtcaacagcgaggccatgcttctagtaattgt
ccctcacgggtttcagcatcgcgaaattctcgtcctactggaacaaatccgagaaatgat
gagagtacagtatcatgtaacacatgtggaacacagtgtgttcttcgtacagccaacaca
gaagctaacaggggaagacaattcttctcatgtccaacacaaggctgcagtttctttgca
tgggaagatggcatcagcaacagtagtgggaatgcaacaacagggtctaatagcggtgga
agcggtagacgtggcaaccgtggtcgtggccgtggaggtagaggcggccaaagtggagga
cgacgtggcagtggaacgagcttcgtctctgcaactggagagccagtgagtggtataagg
tgcttctcatgtggggatccttcacattttgctaacgcttgtcctaatcgtaactcttaa
DBGET
integrated database retrieval system
