Capsella rubella (pink shepherd's-purse): 17874853
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Entry
17874853 CDS
T02984
Name
(RefSeq) nuclear cap-binding protein subunit 2 isoform X2
KO
K12883
nuclear cap-binding protein subunit 2
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb03013
Nucleocytoplasmic transport
crb03015
mRNA surveillance pathway
crb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
17874853
09122 Translation
03013 Nucleocytoplasmic transport
17874853
03015 mRNA surveillance pathway
17874853
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crb03019
]
17874853
03041 Spliceosome [BR:
crb03041
]
17874853
Messenger RNA biogenesis [BR:
crb03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
17874853
Spliceosome [BR:
crb03041
]
Common components
Common spliceosomal components
Cap binding complex
17874853
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
DUF5721
Motif
Other DBs
NCBI-GeneID:
17874853
NCBI-ProteinID:
XP_006280871
UniProt:
R0GAY0
LinkDB
All DBs
Position
Unknown
AA seq
255 aa
AA seq
DB search
MASLFKEQAKLSAYRDRRFSGTQEEFDEALRTSSTVYIGNVSFYTTEEQLYELFSRAGEI
KKIIMGLDKNTKTPCGFCFVLFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQEGRQWG
RGRSGGQVRDEYRTDYDPARGGYGKLVQKELEAQRQLVDYGTGSLGSYQQAAPSNYGRRG
GYNNQGGSNRQGRGGDYHRKRQRDDDRYGRDNSRRNTDHETRRDTDQDMRPEKNPRFRES
GDSDDEGEDDRKRRS
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atggcttctttgttcaaggagcaagctaagctctcggcttatcgagatagaagattttca
ggaacacaagaggagttcgatgaggcgttgaggacatcttcgactgtttacattggcaat
gtgtctttctacactactgaagaacagctttacgagctcttctctagagcaggagagatt
aaaaaaatcatcatgggtttggataagaacactaagacaccctgtggcttttgtttcgtc
ctgttctactcgagagaagatactgaagatgcagtcaaatacataagtgggactattctg
gatgaccggcccattcgtgtggattttgattggggattccaagaaggaagacaatgggga
cgtggtagaagcggtggtcaggttcgagatgaataccgtacagattacgatcctgctaga
ggtggttatggaaaattagttcagaaggaacttgaagcacaaaggcagcttgtagattac
ggtactggctcattgggatcttatcaacaagctgcgccatcgaattatggaaggcgtggc
ggatataataatcaaggaggctcgaatcgccagggaagaggaggagactaccatcggaaa
cgtcaaagagacgatgatcgttatggacgtgacaactcaagaagaaacacagatcatgag
actaggagagatactgatcaggacatgagaccggagaagaacccacgattccgtgagagc
ggtgactccgatgatgaaggtgaagatgatcggaagagaagatcttaa
DBGET
integrated database retrieval system
