Capsella rubella (pink shepherd's-purse): 17874862
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Entry
17874862 CDS
T02984
Name
(RefSeq) peroxisome biogenesis protein 5
KO
K13342
peroxin-5
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
17874862
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crb04131
]
17874862
Membrane trafficking [BR:
crb04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
17874862
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_11
TPR_16
TPR_17
TPR_8
TPR_CcmH_CycH
TPR_14
TPR_19
CFAP70_TPR_C
TPR_7
TPR_9
TPR_12
RMD1-3
PPTA
CFAP70_mid_TPR
TPR_20
ARM_TT21_5th
CABIN1_N
Motif
Other DBs
NCBI-GeneID:
17874862
NCBI-ProteinID:
XP_023639322
LinkDB
All DBs
Position
Unknown
AA seq
728 aa
AA seq
DB search
MAMRDLVNGGAACAVPGSSSSSNPLGALTNALLGSSSKTQERLKEIPNANRSGPGPQFYS
EDQQIRSLPGSELDQPGLQPGGQGSEFFRTFRSVDQNGLGAAWDEVQQGVPMPPMGPMYE
PVQPTFEGPPQRVLSNFLHSFVDSSRGGIPFRPAPVPILGLSQSDKQCIRDRSSIMARHF
FADRGEEFINAQVNALLSSLDIDEGIQARGHVPGRFQELDNYWNESQAVMKPNLHPANDW
ADEFNQHGTYHGGPDSWVQSFEQQHGVNGWATEFEQGQSQLMSNQMRSMDMQNMAAMEQT
RKLAHTLSQDGNPKFQNSRFLQFVSKMSRGELIIDENQVKQASAPGEWATEYEQQYLGQP
SWADQFANDKLAHGPEQWADEFASGRGQQESTEDQWVNEFSKLNVDDWVDEFAEMPVGES
SADAWANAYDEFLNEKNAGKQTSGVYVFSDMNPYVGHPEPMKEGQELFRKGLLSEAALAL
EAEVMKNPENAEGWRLLGVTHAENDDDQQAIAAMMRAQEADPTNLEVLLALGVSHTNELE
QATALKYLYGWLRNHPKYGAIAPPELADSLYHADIARLFNEASQMNPEDADVHIVLGVLY
NLSRDFDKAITSFQTALQLKPNDYSLWNKLGATQANSVQSADAISAYQQALDLKPNYVRA
WANMGISYANQGMYKESIPYYVRALAMNPKADNAWQYLRLSLSCASRQDLIEACESRNLD
LLQKEFPL
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgagagaccttgttaacggcggagctgcctgtgcggttcccggttcttcttct
tcttctaatcctctcggagctctcaccaacgccctacttggttcatcatccaaaactcag
gaaaggctcaaggagatacctaatgctaatcgttcaggtcctgggccacaattttactcg
gaagatcaacagataaggtcacttcctggttctgagttagatcagccaggtctgcagccg
ggtggtcagggatcagaattctttcgtaccttccgctctgtagatcaaaatggtctgggt
gcggcttgggatgaggtgcagcaaggtgtaccgatgcctcctatgggacctatgtatgag
ccagttcagcctacatttgaaggacccccacagagagttttgtcaaactttctgcattca
tttgttgacagtagccgtggtggtattccatttcgtcccgcacctgttccaattctggga
ttgtcacaaagtgacaaacaatgtatccgtgatcgtagtagcataatggcccggcatttt
tttgccgataggggagaggagtttatcaatgctcaggtaaacgcattattgtcatcttta
gatatcgacgaggggatacaagctagaggtcatgttcccgggagatttcaggagctagat
aattactggaatgagtctcaagctgttatgaaacctaacttacatcctgctaacgattgg
gctgatgaatttaaccaacatgggacatatcatggtggtccagattcttgggtccagtct
tttgagcaacagcatggtgtgaatgggtgggccactgagtttgagcagggtcaatctcaa
ttgatgtcaaaccaaatgagaagtatggatatgcaaaatatggctgcaatggagcagact
cgtaagcttgcgcatacactatctcaggacgggaatccaaaatttcagaattcaagattc
cttcaatttgtttcaaagatgagccgcggtgaacttattattgatgagaatcaggtcaag
caagcatcagcccctggggaatgggctacggaatatgaacagcagtatctggggcaacca
agttgggctgatcaattcgcaaatgataaacttgcacatggaccagagcagtgggctgat
gagtttgcttctgggagaggacagcaagaatcaacggaagaccaatgggttaatgagttt
tcgaagttgaatgttgatgactgggtagatgaatttgctgaaatgcccgtgggtgagagt
tcagctgatgcatgggcaaatgcttatgatgagtttctgaatgagaaaaatgctggaaag
caaaccagtggtgtctacgtcttctctgacatgaatccttatgtgggtcaccctgaacct
atgaaagaaggacaggaattgtttcgaaaaggacttctgagtgaagctgcgcttgctcta
gaagctgaggttatgaaaaaccctgagaatgctgaaggttggagattacttggggtcaca
catgcagagaacgatgatgatcaacaggcaatagctgcaatgatgcgtgcacaagaggcg
gatcccacaaatctagaggtgcttcttgcacttggtgtgagtcataccaacgagttggag
caagcaactgctttgaaatatctatatggatggctgcgaaatcacccgaagtatggagca
attgcgcctccagagctagctgattccctatatcatgctgatattgctagattattcaat
gaagcttctcagatgaatcctgaggatgctgatgtgcatatagtattaggcgtgctctac
aatctatcgagggattttgataaagccattacttccttccaaacagcattacaactgaaa
ccaaacgattattctctgtggaataagctcggtgcaacacaagccaacagtgtccagagt
gctgatgccatatctgcttatcaacaggctctagatttaaagcctaattatgttcgtgct
tgggcaaacatgggaatcagttatgcaaaccaggggatgtacaaagaatcaatcccgtat
tatgtccgtgccctcgcgatgaatcctaaagctgataacgcatggcaatacttgaggctc
tcgttaagttgtgcctcaaggcaagatctgattgaagcttgtgagtcaaggaacctcgat
ctcttgcagaaagaattcccgctatga
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integrated database retrieval system
