Capsella rubella (pink shepherd's-purse): 17874877
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Entry
17874877 CDS
T02984
Name
(RefSeq) 25S rRNA (cytosine(2870)-C(5))-methyltransferase
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
crb03009
]
17874877
Enzymes [BR:
crb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
17874877
Ribosome biogenesis [BR:
crb03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
17874877
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Methyltr_RsmF_N
RsmF-B_ferredox
FtsJ
Methyltransf_31
Motif
Other DBs
NCBI-GeneID:
17874877
NCBI-ProteinID:
XP_006279481
UniProt:
R0G7A3
LinkDB
All DBs
Position
Unknown
AA seq
693 aa
AA seq
DB search
MPALTRNKKKGAKPQTPPTKQVTKSKTPPSKPQISTLKKGAKSLKKPPLKKQKKEVVEEA
PLEDDEVSDDASIDAESEELDESDDGEKGSNGLFYNDDEEENEDDDDDEMTLGDDFLEGS
GDEDDEDEEEEEEEGPSDVDSDSDSDGDDLVRKSDAIDRKLAKEKEDADAEQQETNKQDE
TEHDAFRLPTEEELEEEARGPPDLPLLKTRIEDLVRALKNFKALRPTGARRKDCVEQLKA
DLGSYYGYNSFLIGTLIEMFPPGELMELIEAFEKQRPTSIRTNTLKTRRRDLADVLLNRG
VNLDPLSKWSKVGLVVYDSQVPIGATPEYLAGYYMLQGASSLLPVMALAPRENERIVDVA
AAPGGKTTYIAALMKNTGLIYANEMKVPRLKSLTANLHRMGVTNTIVCNYDGRELPKVLG
QNTVDRVLLDAPCSGTGVISKDESVKITKTADEIKKFAHLQKQLILAAIDMVDANSKTGG
YIVYSTCSLMVAENEAVIDYALKKRDVKLVTCGLDFGRKGFIRYREHRFQLSLDKTRRFY
PHVHNMDGFFVAKLKKMSNMKQSSEEDDEAGETVEQAEVSDDDDDDDEAGETVELAEVSD
DDEAEAIEELEKPEEAIEELEKPKEAKENKEEERLAKSKKKKKSKKRKKSTSNVEEPPKV
RKQKKKRSEWKKEIAQAREEKRIAMREKAKEKQ
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgcctgctctcactcgtaacaagaagaaaggtgccaaaccccaaacacctccaacgaag
caggtcaccaaatccaaaactcctccgtcgaagccccaaatctcgacgttgaagaaagga
gccaaatccctgaagaaacctccattgaagaagcagaagaaggaagttgtggaggaagct
cctctcgaagatgatgaagtttccgatgatgcttctatcgatgcggagtcagaagagctt
gatgagtctgatgatggagagaaagggtctaatgggcttttctataatgatgatgaggaa
gagaacgaagatgatgacgatgatgaaatgactttgggtgacgattttctagaaggtagc
ggggatgaagatgatgaagatgaagaggaggaggaggaggagggaccttcggatgttgat
tcggattcagactcggatggagacgatcttgtgaggaagtctgatgctattgatagaaaa
ttagcaaaggagaaggaagacgctgatgctgaacagcaggagactaacaagcaagatgaa
actgaacatgatgcctttcggctaccaactgaagaggaacttgaagaagaagctcgtgga
ccaccagatcttcctctacttaagactagaatagaagaccttgttagagctctgaaaaat
ttcaaggctttgaggccaacaggagccaggaggaaagattgtgttgaacagctcaaagct
gaccttggttcatattatggttataacagttttcttattggaacgttaattgagatgttt
cctcccggtgagcttatggaactaattgaagcttttgaaaagcaaagacctacatctatt
cggacaaacacacttaagacccgtagacgggatcttgcggatgtacttttgaacagagga
gtcaatctagacccattaagcaagtggtcaaaagttggacttgttgtctatgactcacaa
gttccaattggtgcgacacctgaatatttggctggttactacatgcttcaaggtgctagt
tcgcttttgccagtgatggcccttgcccctcgagagaatgagcggattgtggatgtagct
gctgctcctggtgggaaaacaacgtatattgctgcgctaatgaaaaatactggcttaata
tatgcgaatgagatgaaagtacctaggcttaagtcgcttactgccaatctgcatcgaatg
ggcgtcacaaataccatagtttgtaactatgatggaagagagctacccaaggttttaggt
cagaacacagttgacagagtattgttggatgcgccttgcagtgggacaggagtcatatca
aaagatgaatcagttaagattacgaaaacagctgatgagataaagaaatttgctcatttg
caaaagcaacttattctcgctgctattgatatggtggatgccaattccaaaactggtgga
tatatagtttattcaacatgttcccttatggtggctgagaatgaagctgtgatcgactat
gctctcaaaaagagggatgttaaactagtaacatgtggactcgattttggccgaaaagga
tttatcagatatagagaacatcgatttcagctatctttagacaagactagacgtttctat
cctcatgtgcacaacatggacgggttttttgtggccaagctgaagaaaatgagcaacatg
aagcaatcttcagaagaggatgatgaggcaggagaaactgtagagcaagcggaagtgtct
gatgatgatgatgatgatgatgaggcaggagaaactgtagagctagctgaagtgtctgat
gatgatgaagctgaggccatagaggagctggagaagcctgaggaagccatagaggagctg
gagaagcctaaggaagcaaaagaaaacaaggaggaggaaagacttgcaaaatcaaagaag
aaaaagaaaagcaaaaagagaaagaaatcaacatcaaatgtggaagagccacctaaagta
aggaagcagaagaagaagagatcagaatggaagaaggaaattgctcaagctagggaagag
aaaagaatagccatgagagagaaggcgaaggagaagcaatga
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