Capsella rubella (pink shepherd's-purse): 17874907
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Entry
17874907 CDS
T02984
Name
(RefSeq) monofunctional riboflavin biosynthesis protein RIBA 3, chloroplastic
KO
K14652
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:
4.1.99.12
3.5.4.25
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb00740
Riboflavin metabolism
crb00790
Folate biosynthesis
crb01100
Metabolic pathways
crb01110
Biosynthesis of secondary metabolites
crb01240
Biosynthesis of cofactors
Module
crb_M00125
Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00740 Riboflavin metabolism
17874907
00790 Folate biosynthesis
17874907
Enzymes [BR:
crb01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.25 GTP cyclohydrolase II
17874907
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.12 3,4-dihydroxy-2-butanone-4-phosphate synthase
17874907
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Ortholog
Paralog
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Motif
Pfam:
GTP_cyclohydro2
DHBP_synthase
Motif
Other DBs
NCBI-GeneID:
17874907
NCBI-ProteinID:
XP_006280341
UniProt:
R0G9J2
LinkDB
All DBs
Position
Unknown
AA seq
502 aa
AA seq
DB search
MDSALYHPRIFFAHSFINGSYRSPRFANTCWRLNDGSIWEIKASGNGDRNVFDESPPRRA
DGSLFETVGAEITPETDDFFVSDAEGDPDCPTQGYSSIELALQALRQGKFVIVVDDENGE
VEGNLIMAATLTSPKDIAFLIKNGSGIVSVGMKKEDLERLSLTLMSPEMEDEDSSAPTFT
ITVDAKSGTSTGVSASDRAMTVLALSSLEAKPEDFRRPGHVFPLKYRDGGVLRRAGHTEA
SVDLMILAGLRPVSVLSAMLDQEDGSMASLPYMKKLATEHGIPIVSLTDLIRYRRKRDKL
VERITVSRLPTKWGLFQAYCYRSKLDGTENIALVKGNVGNGEDILVRVHSECLTGDIFGS
ARCDCGNQLELAMQLIEKEGRGVVVYLRGHEGRGIGLGHKLRAYNLQDEGHDTVQANVEL
GLSIDSREYGIGAQMLRDIGVRTMRLMTNNPAKFTGLKGYGLAVVGRVPVVTPITKENRR
YMETKRKKMGHIYISNNDHPLA
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atggattctgctttatatcatcctcgaatcttttttgctcacagtttcatcaatggctca
tacaggtctcctaggtttgctaatacttgctggagactgaatgatggttcaatttgggag
attaaggctagtgggaatggtgatcgtaacgtgttcgatgaaagtcctccgagaagagct
gatgggtcgctatttgagacagttggcgcggaaatcacgcctgagactgatgatttcttc
gtgagtgacgcagagggtgatccagattgtcctactcaaggttactcctctattgaactt
gctcttcaagctctacgtcaaggaaagtttgtgattgttgttgacgatgagaatggggaa
gttgaaggtaatctgatcatggcggcaactcttacgagtccaaaagacatagcgtttttg
attaagaatggttctgggattgtctcagttgggatgaagaaagaagacctcgaaagatta
agccttacactcatgtcacctgaaatggaagatgaagattcctctgctccaactttcacc
atcactgtggatgcaaaatccggaacatctactggagtatcagcttcagacagagcaatg
acggttcttgcactttcgtctctcgaagctaaaccagaagatttcaggaggcctggccat
gtgttccctctcaagtacagagacggtggagttttaaggagagctggtcatactgaagct
tcagtggatctaatgatcttggctggtctacgtcctgtctctgttctttcagctatgctt
gatcaagaagatggatcaatggcttctctaccgtatatgaaaaagcttgcaacagaacac
ggcattcctattgtatcattgactgatctaatcagatatcgaagaaagcgagataagctt
gtggagagaatcacagtgtctcgtttgcctaccaaatggggtcttttccaagcttattgt
tatcgatctaaacttgatggaaccgaaaatatcgccctcgttaagggaaacgtcggaaat
ggtgaagacattctggtacgagtgcattcagagtgcttaaccggagacatttttggctca
gcacgatgtgattgtggaaaccaattggaattagccatgcagctaatcgagaaagaggga
agaggagtcgtcgtgtatctccgtggccacgaaggaagaggcattggccttggtcacaag
cttagagcttataacttgcaggatgaaggacacgatacagttcaggccaatgttgaactt
ggtctatccattgattctcgtgaatacggtatcggtgctcagatgctacgagacatagga
gtaagaacaatgagactaatgacgaataaccccgcgaagttcaccggtctgaaaggatac
ggactcgctgtggttggccgtgttccagtggtgacaccaatcaccaaggagaacagaaga
tatatggagaccaaacgcaagaagatgggtcacatttatatctctaataacgatcaccct
ttggcttaa
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