Capsella rubella (pink shepherd's-purse): 17874917
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Entry
17874917 CDS
T02984
Name
(RefSeq) probable sphingolipid transporter spinster homolog 1
KO
K23677
MFS transporter, Spinster family, sphingosine-1-phosphate transporter
Organism
crb
Capsella rubella (pink shepherd's-purse)
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
crb02000
]
17874917
Transporters [BR:
crb02000
]
Major facilitator superfamily (MFS)
Lipid transporters
Sphingosine-1-phosphate transporter (Spinster) family [TC:
2.A.1.49
]
17874917
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Ortholog
Paralog
GFIT
Motif
Pfam:
MFS_1
OATP
Sugar_tr
MFS_4
MFS_3
PTR2
UL42
Motif
Other DBs
NCBI-GeneID:
17874917
NCBI-ProteinID:
XP_006280337
UniProt:
R0GLP0
LinkDB
All DBs
Position
Unknown
AA seq
497 aa
AA seq
DB search
MTKVGLRDSPAKETASTTTAPPTKKRFLTPGRFVTILCIINLINYVDRGVIASNGVNGSS
KTCDAKGVCSAGTGIQGEFSLSNFEDGLLSSAFMVGLLVASPIFAGLSKRVNPFKLIGVG
LTVWTIAALGCGFSYNFWMIAVFRMFVGVGEASFISLAAPYIDDSAPVERKNFWLGLFYM
CIPAGVALGYVFGGYIGNHLGWRWAFYIEAIAMAIFVVLSFCIKPPHQLKGFADKGLKKP
STSVETVALTDAEASKIKTKTPKSKNLFVVFGRDLKALFSEKVFIVNVLGYITYNFVIGA
YSYWGPKAGFGIYQMKNADMIFGGLTIICGIIGTLGGSYVLDRITATLPNTFKLLAASTL
LGAAFCFVAFLMKNMYAFIGLFALGEILIFAPQAPVNYVCLHCVRPNLRPLSMATSTVLI
HILGDVPSSPLYGKMQDRLKNWRKSTLIITSILFLAAIIWGLGIFMNSVDRSNEVSEDDE
VVEEEKLESKADNSPLV
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaagttggcctgagagattctccggctaaagaaacagcttcgacgacgacggcg
ccgccgacaaaaaaacgatttttgactccgggaagattcgttacaattttatgtatcatt
aacttgatcaattacgtggatcgaggagtgatcgcgagtaatggtgttaacggaagctca
aaaacatgcgatgccaaaggtgtttgctctgcaggaactggaattcagggagaatttagc
ttatccaactttgaggatggtcttttgtcatctgcgtttatggttggacttcttgttgct
tctccaatattcgctggattgtccaaaagagttaatccttttaaactaatcggtgtcggc
ttaacggtttggacgattgctgctcttggttgcgggttttcctacaacttctggatgatt
gctgtttttcgaatgtttgttggagttggtgaggcttcgtttataagtcttgcagcaccc
tatattgatgatagcgcacctgttgaaaggaaaaatttctggcttggactgttctacatg
tgtatacctgccggagttgctctaggctatgtgtttggtggatacattggaaaccatttg
ggctggcgttgggcgttctacattgaggcaatcgcaatggctatctttgtcgttttgtcc
ttctgtatcaaaccaccgcatcagctaaaaggttttgctgataaaggtttgaagaaaccc
tctacatctgttgaaacagtagctcttacagatgcagaagcttcaaaaattaaaaccaaa
actcctaaatcaaagaacctgtttgtcgtatttggaagagacttgaaggctcttttcagc
gagaaagtatttatcgtaaatgttcttggttacatcacctacaactttgtgattggagct
tactcatattggggaccaaaagctggttttggtatctaccaaatgaaaaacgcagacatg
atttttggaggacttacaatcatctgcgggataattggaacattaggtgggagctatgtg
cttgatcgcataaccgctacacttccaaacaccttcaagttactagctgcatcaacttta
ctcggtgctgcgttttgtttcgttgctttcttgatgaagaacatgtatgccttcattggt
ttattcgcactgggagaaattctaatctttgcaccacaggctccagttaactatgtgtgt
ctccattgcgttagaccaaacttgagaccactatcaatggctacttcaactgttttgatc
catatcctaggcgatgttccttcttctccactttatggaaaaatgcaggatcgtctcaaa
aattggagaaaatcaactcttatcattacttcaatcctcttcctcgcagctattatttgg
ggacttgggatatttatgaatagtgtggaccggtctaatgaagtaagtgaagatgatgag
gtcgtagaagaagagaaattggaaagcaaagcagacaactctcctctcgtctaa
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