Capsella rubella (pink shepherd's-purse): 17875013
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Entry
17875013 CDS
T02984
Name
(RefSeq) protein transport protein SEC16A homolog isoform X1
KO
K20353
COPII coat assembly protein SEC16
Organism
crb
Capsella rubella (pink shepherd's-purse)
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crb04131
]
17875013
Membrane trafficking [BR:
crb04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
17875013
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
Motif
Other DBs
NCBI-GeneID:
17875013
NCBI-ProteinID:
XP_023635305
LinkDB
All DBs
Position
Unknown
AA seq
1389 aa
AA seq
DB search
MASTPDFLLEDQTDEDFFDKLVDDSYTPTAIHASSSAKELKFDDASDSDDAKAFANLSVA
DDFLAGGDVALNEAVVGNHVANEGTSGSVAEDEPSSIAAEAVPFVNSDANKLKEDHVVRS
EVDDFPLPDTAKESKVVDGSGSPGVKEVDWGSFYADSSANDGRGFGSYSDFFTELDGAAG
NVQGKEEVAVPTGGNLVSNDTKNTSVGLDHSAGFEQHQGQVHLGSASGQYVDNTQSWENL
YPGWKYDASTGQWYQVDGHDASANSQESYINSTSNWENVATDNSDVAYLKQSTASTVAGT
TDSVSTWNQVSQVDNGYPEHMVFDAQYPGWYYDTIAQEWRSLDSYNQASQTSVTGQAHDQ
HVQNGHALTAMYQSNSESNMYNVDDKNQTFKVQDFAIQSQHGSWDQSYYANNQQATNTWQ
SVNAGEPKSAGTSDSLSSLGGNQHVDNLYSSEPVAELRQNAVGAQSFIPQHMNVASVTQN
GPLSFSNHSYSRQQSVDAAQQSFQTNQLFSPSAGRSSDGRPPHAIVNFGFGGKLIVMKDN
NGPLQNSSFGSQGTGGSAVSVLNLAEVISGSASYSSPGEDSLSYFRSLHQQSLPGPLVGG
HVGSKELHKWIDERLLNCESSNMNFSRGKLLKMLLSVLRISCQYYGKLRSPFGTDASQKE
TDTAEAAVAKIFAFAKKDGIQNGGYTPYSQCLQHLPPESQMQVTASEVQNLLASGRKMEA
LQCAQEGHLWGPALVIAAQLGDQFYVDTVKQMALRHLIPGSPLRTLCLLLAGRPEEVFST
GSTGDVHFPGSVNVPQQQPQIGSSSMQCMLDNWEENLGIITANRTVDDELVITNLGDNIW
KERGEIIAAHICYLIADMGFDYYSESARLCLVGADHWKCPRTYASPEAIQRTELYEYSKT
LGNSQYTLLPFQPYKIIYAHMLAEVGKLTAAQKYCQAVLKCLKTGRSSEVEMLKQFVSSL
EERIRIHQQGGFTANLAPAKLVGKFLNFIDSATHRVVGGMPPPAPHSTTGNLQINEYQHQ
PQEAAKLPYSQSANTMSSLIPPASIEPVHEWGGNGRTMAAHSRSVSEPDFGRTPVQDQAD
SAKKKAADGVTQVKSTRSVSSSRFSRFGIGILKNTVGRVLPSRSSNEAKLGEENQFYYDD
NLKRWVERGVEPPAEEAALPPPPTLGAFRSNSLGNENKSDMENEMSPSSGSWSSGSPTPS
ENSPGIPPVSQSSNQFSARGRMGVRARYVDTYNQGRGNSSSMYQSPPVQSAKPPIPAKGK
FFVPAAPASFANNDQVMESVSAESRQENSGDEAVVGSEGAPPTSQSSFQSPTPSPMTMQR
FPSLDNIKRSGSGISLNGDLPAAGSRRTASWSGSVNSSFMSPTSASTFKPSPLNSSSSSL
GEELQEVEL
NT seq
4170 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgactcctgatttcttgttggaggatcaaacggacgaggatttcttcgataaa
cttgttgatgattcctatactcccaccgccattcacgcttcatcctctgctaaggagctg
aaattcgacgacgctagtgactctgatgatgccaaagcttttgccaatctctctgttgct
gacgattttttggctggtggagatgtcgcattgaacgaagcagttgtggggaaccatgtt
gcaaacgagggtacgagtggttccgtggcagaagacgagccttcatctattgccgcggaa
gctgttccatttgtcaacagtgatgcaaataagttaaaggaggatcatgtggtgagatcg
gaggttgatgatttcccactacctgatacagcaaaagaaagcaaggtagtcgatggatct
gggagtcctggggttaaggaggttgattggggctcgttttatgcggattcatctgccaat
gatggtcgtgggtttggttcatactctgatttcttcactgagttggatggagctgcagga
aatgtacagggaaaggaggaggtagctgtgcccactgggggaaatttagtatctaatgat
acaaagaacacaagtgttggtttagatcattcggcagggtttgagcaacaccagggtcaa
gtgcacctcggttctgcaagcgggcagtatgtagataacactcaatcttgggaaaatcta
tatcctggatggaaatatgatgcaagtactggccaatggtatcaagttgatggtcatgat
gcaagcgccaattcacaggagagttatataaactcaacaagtaactgggaaaacgttgct
actgataactcggatgttgcctatctgaaacagagtacagcatctacagtggctggcacc
actgacagtgtgtctacttggaatcaggtttcacaagtggacaatggatatccagaacac
atggtatttgacgcgcagtatcctggatggtactatgacacaattgctcaagaatggcgg
tctctggacagctacaaccaggcttctcaaacatctgtaacaggtcaagctcatgatcag
catgttcagaatggtcatgctcttacagctatgtatcaaagtaatagcgagagtaatatg
tataatgttgacgataaaaaccagactttcaaagtgcaagattttgctattcagagccaa
cacggaagttgggaccaatcttactatgccaacaatcagcaggcaacaaacacttggcaa
tcagtaaatgcaggtgaacctaagtcggctggaacttctgattcattatcaagcttagga
ggaaaccagcatgtagataatttgtacagttcagaacctgtggcagaacttaggcaaaat
gcggttggagctcagagcttcatccctcagcatatgaatgtggctagtgtcacgcagaat
ggaccgttgagtttctcaaaccattcctatagtagacagcaatctgtagatgctgctcaa
cagtcatttcagaccaatcagcttttctccccaagtgcaggaagatcatctgatgggcgt
ccaccacatgcaattgttaattttgggtttggtgggaagctcattgtaatgaaggataat
aatggtcctctgcagaattcatcatttgggagtcagggaactgggggaagcgccgtatct
gtcttaaacttggcagaagttatttctgggagtgcctcttattcaagtcctggggaagat
tctttgagctacttccgtagtctgcatcaacaatctcttccaggtcctttggtaggagga
catgttggaagtaaagagttgcataagtggattgatgagagactattaaattgtgaatct
tccaacatgaatttttcaagagggaaactcttaaagatgcttctttctgtgctcagaata
tcttgtcagtattatgggaaactccgatctccttttggcactgatgcatcacaaaaggag
acagatactgcagaagcagcagtcgccaaaatttttgcatttgccaagaaagatggcatc
caaaatggtggttatactccttatagccaatgcttgcagcatttaccacctgaatcacaa
atgcaagtaactgcttcagaagttcagaatcttctagcttctggtagaaaaatggaggct
ctacaatgtgcacaagaaggccatttatggggaccagcacttgttatcgcagcacaactt
ggggatcagttctatgtagacaccgtgaaacaaatggctcttcgccatctgataccaggg
tcacctttacgaacattgtgcttgctgcttgcaggacgaccagaagaagtgttttccact
ggaagtacaggcgatgtccattttcctggctctgtaaatgtgcctcaacaacaaccacag
attggaagtagtagcatgcagtgcatgcttgacaattgggaagagaatttgggtataata
actgctaacagaaccgtagatgatgagcttgtgattactaaccttggagataacatatgg
aaagaacggggagagataattgcggcacatatttgctatttaatcgcggatatgggattt
gattattactcagaaagcgccagactctgccttgttggggcggaccattggaaatgtcct
cgaacatatgcaagtcccgaggctatacagagaacagagttatatgaatactctaagacg
ctgggaaactctcagtataccctgttgccgtttcaaccatataaaatcatatatgcccat
atgctggctgaagttggtaaacttacagctgcacaaaagtactgtcaagctgttttaaaa
tgcctcaagactggtcgatcatctgaagtagaaatgttgaaacagtttgtttcatcactt
gaagagagaatccgtatccatcaacagggcgggtttactgcgaatttggccccagcaaaa
cttgttggaaaatttctcaactttattgatagtgcgacacatcgtgttgttgggggcatg
ccaccacctgcaccacattcaacaactggaaacctacagataaatgagtatcaacatcaa
ccgcaggaagcggctaagttaccatatagtcaatcggctaatacaatgtcatcattgata
ccacctgcttcaattgaacccgtacatgagtggggtgggaacgggaggacaatggctgca
cattctagaagtgtatcagagccagattttggtaggacgccagtacaggatcaggctgac
tccgcaaaaaaaaaagctgctgatggggtgacacaggtgaaatcaactcgaagtgtctca
agttctcggtttagccgctttggtattggcatactgaagaacactgtagggagggtctta
ccatctcggtcatctaatgaggccaaactgggtgaagagaatcaattctactatgatgat
aatctaaagagatgggtggaaagaggtgtggaacctccagctgaggaagctgcattacct
cctcctccaacgttaggcgcattccgaagcaactcattgggtaatgaaaacaaatctgac
atggaaaacgagatgtctccgtctagtgggagctggagtagtggcagcccaactccgtca
gaaaattctccaggaatcccaccagtctcacagagctcaaaccaattttcagctcgtggg
cgtatgggtgtgcgtgcaagatacgttgacacctacaaccagggccgtggaaactcgtcg
agcatgtatcagtcacctcctgtacaatctgctaaaccgccaattcctgcaaaaggaaaa
ttctttgtcccagcagcacctgcgtcgtttgcaaacaacgaccaggtaatggaatcggtt
agtgctgaaagcaggcaggagaactcaggagatgaagcagtagtaggctctgaaggcgct
cccccaacaagccagtcgtcattccagtccccgacaccatctccaatgacaatgcagaga
tttccaagtctagacaacataaaaagaagtggatcaggaataagcctcaacggcgatctt
cctgctgcaggttcaagaagaacagcttcatggagcggaagcgtcaacagctcgtttatg
tctccaacgagtgcatcaacattcaaaccaagcccactcaatagtagcagtagcagctta
ggagaagagcttcaggaagtggaactgtaa
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integrated database retrieval system
