Capsella rubella (pink shepherd's-purse): 17875084
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Entry
17875084 CDS
T02984
Name
(RefSeq) histone-binding protein MSI1
KO
K10752
histone-binding protein RBBP4
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb03082
ATP-dependent chromatin remodeling
crb03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
17875084
03083 Polycomb repressive complex
17875084
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
crb03036
]
17875084
Chromosome and associated proteins [BR:
crb03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
17875084
Histone modification proteins
HAT complexes
HATB complex
17875084
HDAC complexes
Sin3A-HDAC complex
17875084
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
17875084
PRC2.2
17875084
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
17875084
Heterochromatin formation proteins
Other heterochromatin formation proteins
17875084
Chromatin remodeling factors
NuRD complex
17875084
NuRF complex
17875084
NuRF complex (fruit fly)
17875084
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1C_H4-bd
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_WDR75_1st
WD40_RFWD3
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_RIG_1st
eIF2A
MIOS_WD40
Beta-prop_HPS5
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
17875084
NCBI-ProteinID:
XP_006282322
UniProt:
R0GS99
LinkDB
All DBs
Position
Unknown
AA seq
424 aa
AA seq
DB search
MGKDEEEMRGEIEERLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPEREEPSGKD
YSVQKMILGTHTSENEPNYLMLAQVQLPLDDTESEARQYDDDRSEFGGFGCATGKVQIIQ
QINHEGEVNRARYMPQNPFIIATKTVNAEVYVFDYSKHPSKPPLDGACNPDLRLRGHSSE
GYGLSWSKFKQGHLLSGSDDAQICLWDINATPKNRALDAQQIFKAHEGVVEDVAWHLRHE
HLFGSVGDDQYLLIWDLRSPSASKPVQSVVAHSMEVNCLAFNPFNEWVVATGSTDKTVKL
FDLRKLSSALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTVEDAE
DGPPELLFIHGGHTSKISDFSWNPCEDWVIASVAEDNILQIWQMAENIYHDEDDTPGEEP
SKAS
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggggaaagatgaagaggaaatgagaggggagatcgaggagagactaatcaacgaagag
tacaagatctggaagaagaacactcctttcctctacgatctcgtcatcactcacgctcta
gaatggccttcactcactgtggaatggctccccgagcgtgaggaaccttccggtaaagac
tactccgttcagaagatgattctcggtacccacacttccgagaacgaacccaattacttg
atgctagcccaagttcagcttccccttgacgacaccgagagcgaagctcgtcaatacgat
gatgaccgctctgaatttggcggcttcggctgcgccaccgggaaggtgcaaattatccag
caaattaatcacgaaggcgaggtcaatcgagctcgctacatgcctcaaaatcccttcata
attgctaccaagacagttaatgccgaggtgtatgttttcgattacagtaagcatccatct
aagcctccacttgatggggcttgtaatcctgacttaaggctcagaggtcacagctctgaa
ggctatggcctctcttggagtaagttcaagcagggtcatttgcttagcggctctgatgat
gctcagatctgcttgtgggatattaacgctactcctaaaaacagggctcttgacgcccag
cagatctttaaggctcatgaaggcgttgtggaagatgtcgcatggcatctgagacatgaa
cacctgtttggatctgttggagatgaccaataccttcttatatgggatctgcgttctcca
tctgctagtaaaccagtacagtctgttgttgctcactcgatggaggttaactgtttagcc
ttcaacccatttaatgagtgggttgtggcaacagggtcaactgataagactgtcaaacta
ttcgatctacggaagctaagcagcgctcttcacacatttgatagccataaagaggaggtt
ttccaagttggttggaacccgaagaatgagacaatcttagcatcatgttgcctcggtaga
aggcttatggtttgggaccttagcaggattgatgaggaacagacggtggaggatgcagag
gacggcccacctgagctgctgtttattcacggtggtcacactagcaaaatctcagatttc
tcgtggaatccatgtgaagattgggttattgccagtgttgctgaagacaacatactccaa
atatggcagatggctgagaatatttatcatgacgaggatgacactccaggggaagaacca
tcaaaggcttcttag
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integrated database retrieval system
