Capsella rubella (pink shepherd's-purse): 17875139
Help
Entry
17875139 CDS
T02984
Name
(RefSeq) adagio protein 1
KO
K12115
clock-associated PAS protein ZTL
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
17875139
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
crb04121
]
17875139
Ubiquitin system [BR:
crb04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
17875139
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
Kelch_4
Kelch_3
Kelch_2
Beta-prop_ATRN-LZTR1
Kelch_5
Kelch_6
PAS_9
Kelch_1
F-box-like
PAS
PAS_3
F-box
NANM
F-box_5
Motif
Other DBs
NCBI-GeneID:
17875139
NCBI-ProteinID:
XP_006280197
UniProt:
R0GLB6
LinkDB
All DBs
Position
Unknown
AA seq
609 aa
AA seq
DB search
MEWDSGSDLSADDASSAADDEEGGLFPGGGPIPFPVGNLLHTAPCGFVVTDAVEPDHPII
YVNTVFEMVTGYRAEEVLGGNCRFLQCRGPFAKRRHPLVDSMVVSEIRKCIDEGIEFQGE
LLNFRKDGSPLMNRLRLTPIYGDDDTITHIIGIQFFIETDIDLGPVLGSATKEKSIDAIY
SALAAGERNVSRGMCGLFQLSDEVVSMKILSRLTPRDVASVSSVCRRLYVLTKNEDLWRR
VCQNAWGSETTRVLETVPGAKRLGWGRLARELTTLEAAAWRKLTVGGAVEPSRCNFSACA
VGNRVVLFGGEGVNMQPMNDTFVLDLNSDYPEWQHVKVSSPPPGRWGHTLSCVNGSNLVV
FGGCGQQGLLNDVFVLNLDAKPPTWREISGLAPPLPRSWHSSCTLDGTKLIVSGGCADSG
VLLSDTFLLDLSIDKPVWREIPAAWTPPSRLGHTLSVYGGRKILMFGGLAKSGPLRFRSS
DVFTMDLSEEEPCWRCVTGSGMPGAGNPGGVAPPPRLDHVAVNLPGGRILIFGGSVAGLH
SASQLYLLDPTEDKPTWRILNIPGRPPRFAWGHGTCVVGGTRAIVLGGQTGEEWMLSELH
ELSLASYLT
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atggagtgggacagtggctccgatctaagcgccgatgatgcttcgtcagctgctgatgat
gaagagggaggtctctttcccggcggaggaccaattccatttcccgttggtaatttgctt
catacggcgccttgtggattcgttgttactgatgctgttgagccggaccaccctattatt
tatgtcaatacggtcttcgaaatggttactgggtatcgtgctgaggaagttctcggagga
aattgccgcttcttgcaatgtagaggaccgtttgctaaaagaaggcatccattagttgac
tctatggtggtttccgagataagaaaatgcattgatgagggcatagaattccaaggcgag
ttgttgaactttaggaaagatggatctccattgatgaatagattgcggctgactcctata
tatggagacgatgatactatcactcatataattgggatccagttctttatcgagacagac
attgacctgggacctgttcttggatctgcaacaaaagaaaaatcaatcgatgcgatatac
tcagctttagctgctggggagcgtaatgtttcccgagggatgtgtgggttattccagctt
agtgatgaggttgtgtctatgaagatattgtcacgcctgacaccaagagacgttgcatct
gtcagttctgtatgtcgcaggctgtatgtgctaacaaagaatgaggatctttggcgaagg
gtttgccagaatgcatggggaagtgagactacacgcgtattagagactgttcctggtgca
aaaagactcggttggggccgccttgctagagaactgaccacacttgaagctgcagcttgg
agaaaacttaccgttggaggtgctgttgagccgtctcgctgtaatttcagtgcttgcgca
gtcgggaacagggttgttctttttggaggagaaggtgtgaatatgcagcctatgaatgac
acctttgttttagatctgaattcggattaccctgaatggcaacatgtcaaagtgagctcc
cctcctccgggacgctggggccacacactatcttgcgtaaacggatctaatctggttgta
tttggtggatgtggacagcaaggtttgctgaacgatgtgtttgtcttgaatctcgatgca
aaacctcctacttggagggagatttcgggtttggctcctcctctaccaagatcatggcac
agctcatgcacccttgacggaaccaaactgatagtctctggaggttgtgcagattctggt
gttcttctcagtgacactttcctcctcgacctctctatagataaaccagtgtggagagag
attcctgctgcctggactcccccttcccggttagggcacacactatcggtgtatggagga
agaaagatcttgatgttcggtggtcttgctaaaagcgggcctttgagattccgttcgagc
gatgtcttcacaatggatctaagcgaagaggagccttgttggagatgtgtgaccggtagc
ggaatgcccggagcaggaaacccaggaggagtggcaccaccaccgaggctggatcacgtg
gcggttaaccttccaggaggcagaatcttgatttttggcggttcggtggcagggcttcac
tcagcatctcagctttatctacttgacccgacggaggacaaaccgacttggagaatacta
aacattccagggagaccgccacggtttgcttggggacatggcacatgtgtagtgggagga
acacgagccatagtgctgggtggtcagaccggagaagagtggatgctaagtgagctacac
gagttatcactagcaagctatctcacgtaa
DBGET
integrated database retrieval system
