KEGG   Capsella rubella (pink shepherd's-purse): 17875223
Entry
17875223          CDS       T02984                                 
Name
(RefSeq) DNA repair protein RAD5B isoform X1
  KO
K15505  DNA repair protein RAD5 [EC:5.6.2.-]
Organism
crb  Capsella rubella (pink shepherd's-purse)
Brite
KEGG Orthology (KO) [BR:crb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:crb03400]
    17875223
DNA repair and recombination proteins [BR:crb03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    17875223
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C HIRAN zf-C3HC4_3 zf-RING_UBOX DEAD zf-C3HC4 zf-C3HC4_2 ResIII zf-RING_2 Prok-RING_4 zf-RING_5 zf-C3HC4_4 RING_XB3-XBAT31 Baculo_IE-1 AAA_34 zf-RING_4 zf-ANAPC11
Other DBs
NCBI-GeneID: 17875223
NCBI-ProteinID: XP_023633488
LinkDB
Position
Unknown
AA seq 1225 aa
MAIVDDVEMRITESQAVSSSSDDCKTTPDLVDGSSLVVRTTTGVRISAPSAETSIAETVS
GSKSEPFGVVVTLPGKDEVSGDGKETVESDSFRAADLDNRVSDKEEEEMIVEFIEKSVVE
IVSSALGDDCDVKVEVVESEVCVVKREEEEGEEMIVDSKAEAVAETVSRGSDYEFVSVVV
KEEPDLGTRLEEEVIGVIQGEKSEINGLLQEDEKENDLFSSGDSDGSSAKRRKMEMEPSV
PFGLRSCILAPTPLRVVKPEKLDIPEVIDLESENLNSAVKQEMSFAPVKVEPVEEMKVEA
VKLSLQVKDMKFSGEKKSVYVKKEPVEARKVNVEDGDFPVEKDWYLVGRSLVTATSTSKG
RKLEDNEIVNFTFSSVLNWKIPNIVRFSTKRCGEIGRLPMEWSNWAVCLLRSGEVKMLGR
CVAAPTMLTMMQEIMLYVSFYIHSSIFTDVSKSTWRIGSSPNVDSTLHPLLQLFKHLTIK
PYQKAEFTPEELNSRKRSLNLEDDFDERAALLAIGKRRKGCLQSLEQNKDEEDAPESFTN
RIVGDADIYNLEEMEAPSTLTCNLRPYQKQALYWMSESEKGIDVEKAAETLHPCWEAYRI
CDERAPSIYVNIFSGEATIQFPTATQMARGGILADAMGLGKTVMTIALILARPGRGNPEN
VDDMAADVNADTRKSKESHTAIISVKAKGGTLIICPMALLSQWKDELETHSKPDTVSVLV
YYGGDRTHDAKEIACHDVVLTTYGVLTSAYKQDRVNSIFHRIDWYRIVLDEAHTIKSWKT
QAAKATFELSSHCRWCLTGTPLQNKLEDLYSLLCFLHVEPWCNWAWWSKLIQKPYENGDP
RGLKLIKAILRPLMLRRTKETKDKEGSLILELPPTDVQVIECEQSEAERDFYTALFKRSK
VQFDQFVAQGKVLHNYANILELLLRLRQCCNHPFLVMSRADSQQYADLDSLGRRFLDNNS
DSVSQNAPSRAYIEGVIQDLRDGNSQECPICLESADDPILTPCAHRMCRECLLSSWRSSS
CGQCPICRTILKKTELISCPTDSIFRVDVVKNWKESSKVTELLECLEKIKKSGSGEKSIV
FSQWTSFLDLLEIPLRRKGFEFLRFDGKLAQKGREKVLKEFNETKQKTILLMSLKAGGVG
LNLTAASSVFLMDPWWNPAVEEQAIMRIHRIGQKRTVCVRRFIVKGTVEERMQQVQARKQ
RMIAGALTDEEVRSARLEELKMLFR
NT seq 3678 nt   +upstreamnt  +downstreamnt
atggcaatcgttgatgacgtggagatgcggataacagaatcacaagctgtttcgagtagt
tccgatgattgtaaaaccactccagatttggtcgacggatcctctcttgtcgtcagaaca
accaccggtgtccgaatatcagctccatcggctgagacaagcattgccgagactgtttct
ggttcaaagtctgaacctttcggtgttgtggtgactttaccggggaaagacgaggtaagt
ggtgatggtaaagagactgtagagtctgattcatttagggcggcggatttagataatagg
gttagtgataaagaagaagaagagatgattgttgagtttatagaaaagtctgtggtggaa
attgtttcgagtgctttaggtgatgattgtgatgtgaaggtagaggtagtggaatctgaa
gtgtgtgttgttaagagagaagaagaagaaggagaagagatgatcgttgattcgaaagcg
gaagctgtggctgagacggtttcgagaggttctgattatgagtttgttagtgtcgtggtt
aaggaagagcctgatttaggtacaaggttggaagaagaggtgattggagtaatacaaggt
gagaaaagtgagattaatgggttgttgcaggaagatgagaaagagaatgatctcttttcg
tctggtgattcggatggttcttcagccaaaagaaggaaaatggagatggaaccatctgtt
ccatttggtctcagaagctgtatcctggcgccgacgccccttcgagttgtgaaaccggag
aagttggatatccctgaagttattgatctggaatcggagaatctgaatagtgcagttaaa
caagagatgagttttgctcctgtgaaggtggaacctgttgaggaaatgaaggtggaagct
gtgaagttgagtttgcaagtgaaagacatgaaatttagtggtgagaagaaatcggtgtat
gtcaagaaggaaccggttgaagcaagaaaggtgaacgtggaagacggggattttccagtg
gagaaagattggtatttggttgggaggtcacttgttacggctacttctacaagcaaagga
aggaaattagaagacaacgagattgtgaatttcacattttcctctgttctcaattggaaa
atcccaaatattgttcgtttctctaccaaaagatgtggagagattggtaggcttccgatg
gagtggtctaattgggctgtgtgccttttgagatctggtgaggtcaaaatgcttggaaga
tgtgtagcggcaccaacgatgcttacaatgatgcaagaaattatgttatatgtcagtttt
tacattcacagctcgatattcactgatgtaagcaaatccacttggcggattggttcttcc
ccaaatgttgattctacgcttcatcctcttctccagctttttaaacacttgacaattaaa
ccttatcaaaaggcggagtttactcctgaggaacttaactctcgtaagcgttcactgaat
ttggaggatgactttgatgaaagagcagcattgttggcgatagggaaaagaagaaaaggt
tgtttacagtctctggagcagaacaaagatgaagaagatgctcctgagtcatttacgaat
cggattgttggcgatgcagatatatataacctagaggaaatggaagctccaagtacactc
acgtgtaacctgagaccgtaccagaaacaagctctctactggatgtcagaatctgaaaaa
ggaattgatgttgaaaaggcagctgaaactctacatccttgctgggaggcttatcgaata
tgtgacgagagggcgccttcgatatatgtgaacatcttcagtggtgaagcaacaatccag
tttccaacagcaacacagatggcaagaggcggaatattggcagatgccatgggacttgga
aaaactgtgatgacaatagcactaatacttgcgcgaccaggccgaggcaacccagaaaat
gtagatgacatggcagcagatgttaatgcagatactcgcaagagtaaggagagtcatacc
gcaataatatctgtgaaggcaaaaggaggcactcttattatttgtcccatggcattgtta
agccaatggaaggacgagcttgagactcattcaaagcctgacaccgtgtctgtattagtt
tactatggaggggacaggacacatgatgcgaaagaaatagcgtgtcatgacgtggtcttg
acaacttatggtgtcttaacctcggcttacaagcaggatagggtgaacagtatcttccac
aggattgattggtacaggattgttcttgatgaagctcacacaatcaaatcttggaaaact
caagctgctaaagctacatttgagctgtcctcacattgcagatggtgtctcactgggact
cccttacaaaacaaactcgaagatctttacagtcttctatgcttcctgcatgtcgaacca
tggtgcaattgggcttggtggagtaagttgattcagaagccttatgaaaatggtgatcca
cgaggactgaagttgatcaaggcaattctgaggccattaatgctgagaagaacaaaggaa
acaaaggacaaagaaggaagtctaatccttgaacttcctccaaccgatgtccaagtcatt
gaatgtgaacaatctgaagcagaacgggacttctataccgctcttttcaagagatccaaa
gtccaatttgaccagtttgtggcacaaggaaaagttctgcacaactatgcaaacatcctc
gagctcctcctccgtctacgccaatgttgtaaccacccttttctagttatgagccgagca
gattcacaacagtacgctgacttagatagccttggaaggaggtttcttgataacaactct
gactctgtttcccaaaacgctccttctcgggcatatatcgaaggagtaatccaagatttg
cgcgatggaaatagccaagagtgtccaatctgtctggagtctgcagatgatcccattctc
acaccttgtgcacatagaatgtgccgagaatgtctcctttctagctggcggtcttcgtct
tgtggtcaatgcccaatttgcaggacaatcctgaaaaaaaccgagctgatctcatgcccg
acggatagtatattccgtgttgatgtggtaaaaaactggaaggagtcttcgaaggttaca
gagcttctcgagtgcttagagaaaatcaagaaatctggttcaggcgagaagagtattgtc
tttagccagtggacttcatttttggatcttttggagattccactgcgaagaaaaggattc
gagtttcttagattcgatgggaagctagctcagaagggaagagaaaaggttttgaaagag
ttcaatgaaaccaaacagaaaacaattctgcttatgtctctgaaagctggaggagttggt
ttgaatctaactgcagcttcaagtgtcttcttaatggatccatggtggaatccagcggtg
gaagagcaagcaatcatgagaattcatcgaatcgggcagaaacgaacagtttgcgtcaga
agattcattgtcaagggtacagtggaggaacggatgcagcaagttcaagcgaggaagcag
cggatgatcgcaggagctttgaccgatgaagaagtccgatctgctagacttgaggagctc
aaaatgttgttccgatga

DBGET integrated database retrieval system