Capsella rubella (pink shepherd's-purse): 17875330
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Entry
17875330 CDS
T02984
Name
(RefSeq) DNA-directed RNA polymerase III subunit 1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
17875330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
crb03021
]
17875330
Enzymes [BR:
crb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
17875330
Transcription machinery [BR:
crb03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
17875330
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_1
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
DUF6965
Motif
Other DBs
NCBI-GeneID:
17875330
NCBI-ProteinID:
XP_006279465
UniProt:
R0GMD7
LinkDB
All DBs
Position
Unknown
AA seq
1376 aa
AA seq
DB search
METKMEIEYTKKPYIEDVGSLKIKSINFSMLSDLEVMKAAEVQVWKNSYYDPNCKPFEGG
LLDPRMGPPNKKSICTTCEGNFQNCPGHYGYLKLDLPVYNIGYFNFILDILKCICKCCSN
MLLDEKLYEDHLRKMRNPKMEPLKKTELAKAVVKKCSTMASQRIITCKKCGYLNGMVKKI
PAQMGIGISHDRSKIHGGEVDEFKAAISHIKESTQAINPLTYVLDPNVVLGLFKGMSDKD
CELLYIAHRPENLIITCMLVPPLSIRPSVMVGGSQSNENDLSARLKQIIQDNASLHRILS
QPTTSAKNMQVWDTVQSEVAKYINSEVRGVQNQPDSKPMSGILQRLKGKQGRFRANLSGK
RVEYTGRTVISPDPNLKITEVGIPILMARILTFPECVSRHNIEKLRQCVRNGPNKYPGAR
NVRYPDGSSRALVGDYRKRIADELAIGCIVDRHLEEGDAVLFNRQPSLHRMSIMCHRARI
MPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAITLMGVQNNLCTPKNGEILVA
STQDFLTSSFLITRKDTFYDRAAFSLICSYMGDGMDAIDLPTPTVLKPIELWTGKQIFSV
LLRPNASVRVYVTLNVKEKNFKKGNHGFDETMCTNDGWVYFRNSELISGQLGKATLGNGN
KDGLYSILLRDYNSHAAAVCMNRLAKLSARWIGIHGFSIGIDDVQPGEELSRQRKDAIQS
GYDDCHSIIENFNRGNLQLKAGLDGAKTLEAGITGILNTIREDTGKACMDGLHWRNSPLI
MSQCGSKGSPINISQMVACVGQQTVNGHRAPDGFIDRSLPHFPRMSKSPAAKGFVANSFY
SGLTATEFFFHTMGGREGLVDTAVKTASTGYMSRRLMKALEDLLVHYDNTVRNASGCILQ
FTYGDDGMDPALMEGKDGAPLNFNRLFLKIQATCPPRSHHNYLSSEELSQKFEEELVRHD
KNRVCTDAFVKSLRDFVSLLGVKSASPPQVLYKASGVTDKQLEVFVKICVSRYREKKIEA
GTAIGTIGAQSIGEPGTQMTLKTFHFAGVASMNITQGVPRINEIINASKNISTPVISAEL
ENPLELTSARWVKGRIEKTTLGQVAESIEVLMTSTSASVRIILDNKIIEEACLSISPWSV
KNSILKTPRIKLTDNDIRVLDTGLDITPVVDKSRTHFNLHNLKNVLPSIIVNGIKTVERV
VVAEDMDKNKQIDGKKRWKLFVEGTNLLAVMGTPGINGRTTTSNNVVEVSKTLGIEAART
TIIDEIGTVMGNHGMSIDIRHMMLLADVMTYRGEVLGIQRTGIQKMDKSVLMQASFERTG
DHLFSAAISGKVDNIEGVTECVIMGIPMKLGTGILKVLQRTDDLPKLKYGADPIIS
NT seq
4131 nt
NT seq
+upstream
nt +downstream
nt
atggagacgaagatggaaattgaatacactaagaagccttacatcgaagatgttggttct
cttaagataaaaagcataaacttctctatgctttctgatcttgaggtcatgaaagccgct
gaagttcaggtctggaagaatagttactacgatcccaattgtaaaccctttgaaggcggc
ttgttggatcctcgaatgggtcctccaaacaaaaagtctatatgcacaacctgtgagggg
aacttccaaaattgtccaggacactatggatatctgaagcttgacctcccagtttacaac
attggatacttcaattttatcctcgacatattgaaatgcatttgtaagtgctgttcgaac
atgcttttggacgagaaattgtatgaagatcacttgaggaagatgcggaatcccaaaatg
gagccattgaagaagactgaattggcaaaagcggttgtcaagaagtgcagtacgatggct
agccagagaattataacgtgcaaaaaatgtggctacctgaatggtatggtgaaaaagatt
ccagcccagatgggtataggtatcagtcatgaccgatctaaaattcatggtggagaggtt
gatgaatttaaagctgcaatatcccacataaaggagtctactcaagcaataaatcctctt
acatatgttcttgatcctaacgtggtgcttgggctttttaaaggaatgagtgacaaggac
tgtgaacttctttatattgcccacagacctgagaatcttatcataacgtgcatgcttgtg
ccacctttatcaatccgaccatctgttatggttggtggctcccaaagtaatgaaaatgat
ttatcagcgcgattaaagcaaatcattcaagacaatgcttcacttcatagaattttaagt
caacctaccacttcggcgaaaaacatgcaagtgtgggatacagtacaaagcgaggttgca
aaatacattaacagtgaagtccgtggtgttcaaaaccagccagacagcaaaccaatgagt
ggaattcttcagcgtctcaaaggaaaacagggacgtttccgtgcaaacttgtcaggaaag
cgtgtcgagtacactggtagaactgttatttcacctgatcccaatctgaaaattacagag
gtaggaattcccatccttatggctcggatcttaacttttcctgaatgtgtttcccgtcat
aatattgagaagttaagacaatgtgtccgtaatggccctaataaataccctggtgccaga
aatgtcagatatccggatggttcttcaagggctttggttggtgattatcgcaagcgtatt
gctgatgaactggccattgggtgcatagttgaccgccatttggaagaaggggatgctgtt
ctttttaacaggcagccaagtctgcatcgaatgtctatcatgtgtcacagggcaagaata
atgccttggagaacgttgaggttcaatgaatcggtttgtaacccatataatgctgatttc
gatggtgatgagatgaacatgcatgtaccacaaacagaggaggctcggacagaggctatt
acattaatgggggtacaaaacaatttatgcaccccaaaaaatggagaaattttagtagca
tcaacgcaggattttttgacatcttcctttttgataacgagaaaggacacattttatgac
cgtgcagccttttcacttatatgttcttacatgggagatggcatggatgctattgatttg
cccacacccacagtccttaagccaatagagctttggactggtaaacaaatttttagtgtt
ttgctgcgtccaaatgcaagtgttagagtctacgtaactcttaatgtgaaagagaagaac
ttcaagaagggaaatcatggtttcgatgagacaatgtgcacaaatgatggatgggtttat
tttcgaaatagtgagctaatatcaggacaattggggaaggctacgttagggaatggaaac
aaggatggattatattctattcttctaagagattacaactctcatgctgctgcagtttgc
atgaatcggctagcaaaattgagtgctcggtggattggaatccatggattctccattgga
atcgatgacgttcaacctggggaagagttgagtaggcaaaggaaagacgcaatccagtct
ggatatgacgactgccatagcataattgagaattttaatcgaggaaatttgcaacttaaa
gctggtctagatggtgcaaaaacattagaagctggcataacagggattcttaatacaatt
cgagaagacactgggaaggcctgtatggacggattacattggagaaacagtcccttgatc
atgtcacaatgtggttccaaaggatctcctatcaatatcagtcagatggtcgcatgtgtt
ggtcagcagacagttaatggtcaccgtgctcctgatggatttatagatcgaagccttcct
catttccctaggatgtccaaatcacctgcagctaaaggttttgttgctaattcgttctac
agtggtcttactgccacagaatttttctttcacactatgggtggacgagaaggtctagtt
gatacagcggtgaaaactgccagtacaggttacatgtcccgtagattgatgaaagccttg
gaggatctattagtccattatgacaacacagtacgaaatgccagcggatgtatacttcaa
tttacttatggggatgatggaatggacccagcactaatggaaggaaaggatggagctcct
ttaaattttaatagattatttctgaaaattcaggctacatgtcctcctcgatctcaccac
aactatctttcttcagaagaattgtcgcaaaagtttgaagaggaattagtaagacatgat
aaaaatcgggtttgcactgatgcctttgtgaaatctcttcgagattttgtttccttgctc
ggagttaagtctgcaagcccgccccaggttttatataaagcatctggtgtgactgataag
caactcgaggtatttgtaaaaatttgtgtatctcgctatcgggaaaaaaaaattgaggct
gggactgcaattgggacaataggagctcagagtattggagaacctgggacacaaatgact
cttaaaacttttcactttgccggagttgcgagcatgaatatcacacaaggagtcccccga
attaacgaaatcataaatgcttcaaaaaatataagcacacctgtcatctctgcagaactt
gagaaccccctggaattgactagtgcacgatgggtgaaaggacgcatcgaaaaaactact
ctaggacaggttgctgagagtatcgaggtgctaatgacttcaacatcagcgtcagtgaga
ataattcttgacaataaaataatcgaggaggcatgtttatctataagcccctggtcggta
aaaaattccatccttaagacccccagaatcaaactgaccgataatgatattagggtctta
gatacgggattggacattactcctgtggtggataaaagtagaactcattttaatctccac
aatctgaagaatgtgctgccaagtattatagtgaatgggatcaaaacagttgagcgagtt
gttgtcgcggaggatatggataaaaataaacagatagatgggaaaaaaaggtggaaacta
tttgtggagggcacaaacctcctggctgttatgggaactccaggaatcaatgggagaact
actacaagtaataatgttgtcgaagtgagcaaaacactgggaatcgaagctgcaaggaca
acaattattgatgaaatagggacagtaatgggaaaccatggtatgagtatagacattcgt
cacatgatgcttttggctgatgtcatgacgtacaggggggaggttctcgggatacaaaga
accgggattcagaagatggataaaagtgtgctgatgcaggcatcttttgagaggactgga
gatcatttatttagtgcagcaattagtggaaaggtggataacatagagggagttacagaa
tgtgtgattatgggcataccaatgaagctcggaaccggaatactcaaagtcctccaaagg
accgatgatctacccaagttgaaatatggagctgatccaattatctcttga
DBGET
integrated database retrieval system
