Capsella rubella (pink shepherd's-purse): 17875401
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Entry
17875401 CDS
T02984
Name
(RefSeq) 3-ketoacyl-CoA synthase 20
KO
K15397
3-ketoacyl-CoA synthase [EC:
2.3.1.199
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb00062
Fatty acid elongation
crb01100
Metabolic pathways
crb01110
Biosynthesis of secondary metabolites
crb04626
Plant-pathogen interaction
Module
crb_M00415
Fatty acid elongation in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09100 Metabolism
09103 Lipid metabolism
00062 Fatty acid elongation
17875401
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
17875401
Enzymes [BR:
crb01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.199 very-long-chain 3-oxoacyl-CoA synthase
17875401
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Paralog
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Motif
Pfam:
FAE1_CUT1_RppA
ACP_syn_III_C
Chal_sti_synt_C
ACP_syn_III
Chal_sti_synt_N
Thiolase_N
Motif
Other DBs
NCBI-GeneID:
17875401
NCBI-ProteinID:
XP_006280299
UniProt:
R0EVL7
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All DBs
Position
Unknown
AA seq
529 aa
AA seq
DB search
MSHNQNQPHRPVPVHVTTSEPNPNPNNLPNFLLSVRLKYVKLGYHYLISNALYILLLPLL
AATLANISSFTLNDLSLLYNTLRFHFLSATLATALLISLSTAYFTTRPRRVFLLDFSCYK
PDPSLICTRETFMDRSQRVGIFTEDNLAFQQKILERSGLGQKTYFPEALLRVPPNPCMEE
ARKEAETVMFGAIDAVLEKTGVKPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNILSY
NLGGMGCSAGLISIDLAKQMLQVQPNSYALVVSTENITQNWYLGNDRSMLLSNCIFRMGG
AAVLLSNRSSDRSRSKYQLIHTVRTHKGADDNAFGCVYQREDNNEEETGKVGVSLSKNLM
AIAGEALKTNITTLGPLVLPMSEQLLFFATLVARKVFKVKKIKPYIPDFKLAFEHFCIHA
GGRAVLDEIEKNLDLSEWHMEPSRMTLNRFGNTSSSSLWYELAYSEAKGRIKRGDRTWQI
AFGSGFKCNSAVWKALKTIDPMDEKTNPWIDEIDDFPVQVPRITPVTSS
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgagccataaccaaaaccaacctcaccggccagtcccggtccatgtcacaacctccgag
ccaaaccctaacccaaacaacctcccaaacttcctcttatccgttcgtctcaagtacgta
aaactcggataccattacctaatctccaacgctctttacatcctcctcctccctctcctc
gccgctacactcgctaacatctcttctttcaccttaaacgacctctctctcctctacaac
actctccgtttccatttcctctccgccacactcgccaccgcgctcttgatctctctctcc
accgcctacttcaccacacgtcctcgccgtgtcttcctcctcgacttctcatgctacaaa
cctgacccttctttgatctgcacccgtgaaacgttcatggacagatctcaacgtgtaggt
atcttcacagaagacaacctcgctttccaacaaaagatcctcgaaagatccggtctaggt
cagaagacatacttccctgaagctcttcttcgtgtccctcctaacccttgcatggaagaa
gctaggaaagaggcagagacagttatgttcggagctatcgatgcggttcttgaaaaaact
ggtgtgaaacctaaagacattgggatacttgtcgtgaactgtagtttgtttaatcctact
ccatcactttctgctatgattgtgaataagtataagctcagaggcaacattttgagctat
aatcttggtggaatgggttgtagtgctggacttatctccattgatctcgctaaacagatg
ctccaggtgcaaccaaactcatacgcactagtagtgagcacagagaacataactcaaaat
tggtacttaggcaacgaccgatcaatgcttctatctaactgtatcttccgtatgggtgga
gctgcagtacttctctcgaaccgttcatctgatcgtagccgttcgaagtatcagctcatc
cacaccgttcgtacacacaaaggagctgacgacaatgcgttcggctgtgtttaccaacga
gaagacaacaacgaggaagaaacaggcaaagtcggagtctcgctctctaaaaacctaatg
gcaatagctggagaagctctcaagacaaacatcacaactctcggaccattagtcctacca
atgtccgaacaacttctctttttcgcgacactagtggcccgtaaagtctttaaagtcaag
aaaataaagccttacattcctgacttcaagctagcttttgagcatttctgtattcacgct
ggaggtagagctgtgcttgatgagattgagaagaacttggatttatctgaatggcacatg
gagccatcgaggatgacgttaaacaggtttggtaacacttcgagtagctctctttggtat
gagcttgcgtatagtgaagctaaaggaaggattaagagaggagataggacttggcagatt
gctttcggatcaggctttaagtgtaacagtgctgtttggaaagctttgaaaacgattgat
ccaatggacgagaagacgaatccatggatcgatgagatcgatgacttccccgttcaagtt
cctaggatcactcccgttacatcgtcgtag
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