Capsella rubella (pink shepherd's-purse): 17875438
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Entry
17875438 CDS
T02984
Name
(RefSeq) serine/arginine-rich splicing factor RS41 isoform X2
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
17875438
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
crb03041
]
17875438
Spliceosome [BR:
crb03041
]
Common components
Common spliceosomal components
SR proteins
17875438
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
RNA_bind
RRM_5
RRM_Nup35
DUF2129
Motif
Other DBs
NCBI-GeneID:
17875438
NCBI-ProteinID:
XP_006280781
UniProt:
R0GAP8
LinkDB
All DBs
Position
Unknown
AA seq
334 aa
AA seq
DB search
MKPVFCGNFEYDARESDLERLFRKYGKVERVDMKSGFAFVYMEDERDAEDAIRALDRYEF
GRTGRRLRVEWTKNDRGAAGRPGGSRRSSSGMRPSKTLFVINFDAQSTRTRDLERHFEPY
GKIVNVRIRRNFAFIQYESQEDATRALDATNSSKLMDNVISVEYAMKDDDARGNGYSPER
RRDRSPDRRRRSPSPYRRERGSPDYGRGASPVAHRRERTSPDYGRGRRSPSPYKRARLSP
DYKRDDRRRERVASPENGAVRNRSPKKERGESRSPPPYEKRRERSRSRSRSKSSPENGQV
ESPGQIMEEEPGRGYDGAESPIRESPSRSPPAEE
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgaagcctgtcttctgcgggaactttgagtatgatgctcgtgagagtgatcttgagcgg
cttttcaggaaatatggcaaggtcgagagggttgatatgaaatctgggtttgcttttgtc
tatatggaagacgagagagatgctgaagatgccatcagagcgcttgatcgctatgaattt
ggccgcacgggacgcagactccgtgttgagtggacaaagaatgatcgtggagctgctgga
agaccaggtggttcaaggagatcatcgtctggcatgagaccgtccaagactctttttgtg
atcaactttgatgcacagagcactaggactcgggacttggagagacactttgagccatat
ggaaaaatcgtaaatgttagaatcagaaggaattttgcgtttatccaatatgagtctcaa
gaagatgccaccagagcactggatgctacaaattcaagtaagctgatggataatgtgatc
tcagtggagtatgcaatgaaagatgatgatgcgagagggaatggatacagtcctgaaaga
cggcgtgataggtcacctgataggagaaggcggtcaccgagtccttacaggagagaaagg
ggaagtcctgactatggccgaggtgctagtccagtagctcacaggagggaaaggactagt
cctgattatggtcgcggacgacgcagcccgagcccttacaagagagccagacttagccct
gattacaagagggatgaccgtaggagggagagggtggctagcccagagaatggagctgtg
aggaaccgaagtccaaaaaaggaacgtggtgaaagcaggagccctcctccatatgagaag
aggagggagagatcgaggtcaaggtcaaggtcgaagtccagccctgagaatggtcaagtt
gaaagccctggacaaattatggaagaagaaccaggaagaggatatgatggtgcagaaagc
ccgatacgcgagagcccctctcgttcgcccccagcagaggaatga
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