Capsella rubella (pink shepherd's-purse): 17875478
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Entry
17875478 CDS
T02984
Name
(RefSeq) probable alpha-mannosidase At5g66150 isoform X1
KO
K01191
alpha-mannosidase [EC:
3.2.1.24
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb00511
Other glycan degradation
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
17875478
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crb04131
]
17875478
Enzymes [BR:
crb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.24 alpha-mannosidase
17875478
Membrane trafficking [BR:
crb04131
]
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Selective cargos
17875478
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_38N
Glyco_hydro_38C
Alpha-mann_mid
Glyco_hydro38C2
Laman-like_dom
Glyco_hydro_57
Motif
Other DBs
NCBI-GeneID:
17875478
NCBI-ProteinID:
XP_006279760
UniProt:
R0GNA6
LinkDB
All DBs
Position
Unknown
AA seq
1032 aa
AA seq
DB search
MAKPSLSLLKAAVCVIVSVLRLVNGGGYVKYGTEARVVPGKLNVHLVPHSHDDVGWLKTV
DQYFVGSNNSIQNACVRNVLDSVVDSLLRDPNRKFVFGEMAFFTRWWEEQSPQTQEQVRR
LVKSGQLEFVNGGWSMNDEATCHYIDMIDHTTMGHRFIKQHFNTTPRAAWQIDPFGHSSV
QAYLLGAELGLDSLHFARIDYQDREKRKAEKSLEVIWRGSKTLASSSQIFTNVFLVHYGP
PTGFHYEVSDDYVPLQDDPSSDGYNIKEAVDNFVNASMVYANVSRGNHVMWTMGDDFQYQ
FAESWFRQMDRLIHYVNKDGRVNALYSTPSLYVDAKNDANVTWPLKTDDFFPYADREYAY
WTGYFTSRPALKRYVRALSGYYLAARQLEFLVGKKSGGPNTCSLADALGIAQHHDAVTGT
AKQHVTDDYMKRLAFGASEAEAVVNSALACLLNKSPKGGCIKPTIAFSQCSLMNISYCPS
TEETISGQKSLILVAYNSLGWNRTEIIRIPVNDAGLSVEDTSGNTLDAQYIPMDNVTSNL
RMFYTKAYLGKLSTQIPKYWLVFKATVPPLGWNTFYISKASTQGSSNHTHSSVLLNPVSS
TTEIGPGNLKMLFSSDSGLVQRMYNSRTGADLMVNQNYFWYASNVGDANDPQVSGAYIFR
PNGSLAYPVSSFKPKLQIVQGPLVDEVHQQFSPWVAHVVRLYKDKEHAEFEFTIGPIPVN
NNDLMGKEIITRMVTDMSTDKAFYTDSNGRDFLKRVRDKRTDWPLQVNEPIAGNYYPLNL
GMYAKDEKAEFSVLVDRATGGASIKDGEIELMLHRSTCMDDSRGVDESLVETVCVNDTCA
GLTVRGSYYVSINKVGEGGRWRRETGQEIYSPLLMAFAQENKEKWKASNTVKGYGMDPLY
TLPPNIALITLEEMDLGNVLLRLAHLYEAGEDNDYSKLAKVELKKLFSGKMIKEVTEMNL
SANQEKAKMKEKMKWKVEGEAEEEEASSPLRGGPVDKSSFVVELGPMEIRTFVLQFSQKQ
RRRRKLFVPNML
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaacccagtttgtctttattgaaagcagcagtgtgtgttattgtttctgttctt
cggctcgtcaacggcgggggatacgtgaagtacggcaccgaagctcgagtggttcccggg
aaactaaatgttcatcttgttccgcattcccatgacgatgtcggatggttgaaaaccgtt
gatcagtactttgtcggatcaaacaatagtatccagaacgcttgcgtgaggaacgtgctg
gactcggtggtcgattctttacttcgcgatcccaatagaaagtttgtgtttggggaaatg
gcgttctttacccgttggtgggaagaacaaagcccccaaacacaagagcaagtgaggaga
cttgtgaaatccgggcaacttgagttcgtaaatggaggatggagtatgaatgatgaagca
acgtgccattacatagatatgatagaccacaccacaatggggcatcgctttataaagcaa
catttcaatacaactcctcgtgctgcttggcaaatcgacccctttggccattcctctgtc
caagcttacctccttggagcggagttagggttggactctctgcatttcgcgagaatcgat
taccaagacagagaaaagcgaaaggccgagaaatcactcgaagtcatctggagaggatcc
aaaactttagcctcttcttctcaaatcttcaccaatgtctttcttgttcattatggccct
cccactggctttcactatgaagtcagcgatgattacgtccccctccaggacgaccctagt
tccgatggctataacatcaaggaggcggttgataatttcgtcaatgcttctatggtttat
gccaatgtgagtcgagggaaccatgtcatgtggaccatgggtgatgattttcagtaccag
ttcgccgagtcttggttcagacaaatggacagacttatccattatgttaacaaggatggc
cgtgtcaacgccttgtactccacaccatctctctatgttgatgccaagaatgatgccaat
gttacttggcctctcaagactgatgactttttcccatatgcggatcgggaatacgcttat
tggactggctacttcaccagccgtcctgctcttaaacgatatgttcgggctctaagtgga
tattacttggctgcaaggcaacttgaatttctggtgggcaagaaatctggaggtccaaat
acttgcagtcttgcagatgctctagggatagctcaacaccatgacgctgtcactggaact
gccaagcagcatgtgactgatgattacatgaaacgcctagcttttggtgcttctgaggca
gaagctgtggtgaattctgcgctggcatgcttattgaacaagtcaccaaaaggtggctgc
ataaagcctacaatagcattcagccagtgctctttgatgaatatcagctattgcccctcg
acagaagaaactatttcaggccaaaagagcttgattctggtggcgtataactcccttgga
tggaaccgtacagaaatcataaggataccggttaatgatgcaggtctaagtgtggaagat
acatctggaaatacccttgatgctcaatacatccccatggataatgtcaccagcaacctc
agaatgttctacacaaaagcttatctaggaaaactttcaacgcagattccaaagtattgg
ctcgtgtttaaagcaacagtgccaccacttggttggaacacgttctacatctctaaagca
tccacacaaggaagcagcaatcacacacactcttcagtgctgcttaatccggtgagcagt
acgactgaaattggtccaggaaatctaaagatgttgttttcttcagactctggtcttgta
caacggatgtacaactccagaacaggagctgacctaatggtgaatcagaactatttttgg
tatgcttcgaatgtgggggacgcaaacgatccccaggtttcgggtgcatatatttttcga
cctaatggttccttggcttatcctgtttcttcgttcaaaccgaagttgcagattgtgcaa
gggcctttagtagatgaggtgcaccagcagtttagtccttgggtggcacatgtggtcaga
ctgtacaaagataaagagcatgccgaatttgagttcactattggtccaattcctgttaat
aataatgatctaatggggaaagagattatcacccgaatggtaacagatatgagtacagat
aaagcgttctatacagactctaatggaagagactttctgaaacgggtccgggataaacga
acagactggcctctccaagtgaatgagccaatagcaggaaactactatccgcttaatctt
ggaatgtacgcaaaggatgagaaagcagagttttcggtgttggttgatcgggctactgga
ggtgctagcattaaggacggtgaaatagagttgatgcttcacaggagtacgtgcatggat
gactcgagaggagtagatgagagccttgtagaaactgtgtgcgtgaatgatacatgcgca
ggattgacggttcgtgggagttactatgtaagcataaacaaggtaggagaaggagggcgg
tggagacgagagactgggcaggaaatatactctccgctgctaatggcattcgcacaggag
aacaaggagaaatggaaagcctcaaatacagtgaaaggttatggcatggatcctctctac
accttgcctccaaacattgctctcatcactcttgaggagatggatcttgggaacgtgctt
ctccgcctggctcatctctatgaggctggagaagacaatgattactcaaaactcgctaaa
gtggagctgaagaagttgttttccgggaaaatgatcaaagaagtgacagaaatgaatttg
tcggcaaatcaagaaaaagcaaagatgaaggagaagatgaagtggaaagtggagggggaa
gcagaagaagaagaagcttcttccccgctaagaggcggacccgttgacaagtcgagtttt
gtagtggagcttggtcccatggagattcgtacatttgtgcttcagttttctcagaaacaa
cgtagaaggagaaagctgtttgtccccaatatgttgtag
DBGET
integrated database retrieval system
