Capsella rubella (pink shepherd's-purse): 17875880
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Entry
17875880 CDS
T02984
Name
(RefSeq) E3 ubiquitin protein ligase RIN3
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
17875880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
crb04121
]
17875880
Enzymes [BR:
crb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
17875880
Ubiquitin system [BR:
crb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
17875880
Multi subunit type E3
ERAD complex
17875880
LMBR1L-GP78-UBAC2 complex
17875880
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_SYVN1_N
zf-RING_2
CUE
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-ANAPC11
zf-C3HC4_2
zf-C3HC4_3
zf-RING_11
Endonuclease_7
zf-C3HC4_4
zf-RING_16
zf-RING_5
zf-RING_Vps41
U-box_ZFPL1
zf_RING_Vps8_fungal
zf-HC5HC2H
PHD
RINGv
Motif
Other DBs
NCBI-GeneID:
17875880
NCBI-ProteinID:
XP_006280230
UniProt:
R0GPN9
LinkDB
All DBs
Position
Unknown
AA seq
578 aa
AA seq
DB search
MGLRYLPISVAMTALSFVGLQVWSELSLDRHKADGLISKNVSLGDSEDALDLLLGSHTTI
ALLTSFVLNVYILLVLSLKTLFFGDLYAIETKKLVERLANYIIYKGTFLPLVVPPTIFQG
VLWTIWLTVLCTLKMFQALARDRLERLNASPSSTPWTYFRVYSALFMVLSAVLCWIKLSL
TIYNTIGSSLYLLLLFEPCSVAFETLQALLTHGFQLLDMWINHLAVKNSDCQRSKFLDSM
TAGSLLEWKGLLNRNLGFFLDMATLVMALGHYFHIWWLHGMAFHLVDAVLFLNIRALLSA
ILKRIKGYIKLRVALGALHAALPDATSEELRAYDDECAICREPMGKAKRLHCNHLFHLGC
LRSWLDQGLNEVYSCPTCRKPLFVGRTESEANSSRGEVLGDEQLARQIERQNSSVHALTT
GMFPTETPNSTESDPWRNSGLDSSWLQTWSDQGVDAAGPSGGSRSVGLGQVQMMMRHLAS
VGEGYALNALDDASWGLWPMNPSRVSISSSYVPPAGGGRTGGLHLRTASRADNNMASILA
MVGTVREILPHVPDEIIFQDLQRTNSAAVTVNNLLQIS
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atggggttaagatatctgccgatttccgtggcaatgacagctttgagctttgtgggttta
caagtctggagtgagttgtctctggatagacataaagctgatggtttaatctccaagaac
gtttctttaggagattctgaggatgcccttgacctgcttctgggttctcacactacaatt
gccttgctgacaagttttgtgctcaatgtgtacattcttcttgttctttctctcaagact
ctgttttttggggatctatatgccattgaaactaaaaagctggtggaaagacttgccaat
tacatcatttacaagggcactttcctgccgttggtggttccacccacaatatttcagggg
gtcctatggacaatctggttaactgttctgtgtactcttaagatgtttcaagctttggct
agagatcggcttgaaagattgaatgcatctccttcttctactccttggacatactttcgt
gtgtattcagcgctgttcatggttctctctgctgttttgtgctggataaagctttccctt
acgatatacaatacaattggttcatctctgtatttattgttactttttgagccatgcagt
gtagcttttgagaccttgcaggcattgttgactcacgggtttcaactgcttgatatgtgg
atcaaccacttagcagtcaagaattcagattgccaaagatcaaagtttcttgattctatg
acagcaggctcattattggaatggaaaggcctccttaatcggaaccttggttttttccta
gacatggctaccttagtaatggccctcggtcattattttcacatttggtggctccatgga
atggcctttcatctggtggatgcagttttgtttctcaacatacgtgccttgctaagtgca
attttgaaacgcataaaaggatacattaaactgcgagtagctttaggtgctcttcatgca
gctcttcctgatgcaacttcagaagagctgcgggcatatgatgacgaatgtgctatatgt
cgggaaccaatgggtaaggcaaaaagacttcattgcaaccatctttttcatcttggatgc
ctgcgatcatggttggatcaaggtttaaatgaggtttactcttgtcctacatgtcgtaag
ccgctttttgttggtagaactgaaagtgaggcgaattctagcagaggagaagtcttagga
gatgaacagttagcccgtcaaattgagagacaaaacagttctgtgcatgcactaaccact
gggatgtttccaaccgagacgcccaattccactgaaagtgatccttggaggaattcagga
ctggactcaagctggctacaaacatggtcagatcagggtgttgatgctgcgggtccctct
ggtggctccagatctgttggactggggcaggttcagatgatgatgagacatcttgcatct
gttggggaaggttatgctctgaatgcactcgatgacgcttcttggggtctctggccaatg
aatccttcgcgagtatcgatttcgtcttcatatgttcctcctgctggtggtggaagaaca
ggtggtctgcatctgagaactgcatctcgtgcagataataacatggcaagtatactagct
atggtcgggacagtaagggaaatcctgccacatgtgcctgatgaaataattttccaggac
ctgcaaagaacaaattctgctgctgtcacagtgaacaatcttctccagatatcatga
DBGET
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