Capsella rubella (pink shepherd's-purse): 17875882
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Entry
17875882 CDS
T02984
Name
(RefSeq) serine/threonine protein phosphatase 2A regulatory subunit B''alpha
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
17875882
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
crb01009
]
17875882
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crb03019
]
17875882
03036 Chromosome and associated proteins [BR:
crb03036
]
17875882
Protein phosphatases and associated proteins [BR:
crb01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
17875882
Messenger RNA biogenesis [BR:
crb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
17875882
Chromosome and associated proteins [BR:
crb03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
17875882
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EF-hand_13
EF-hand_7
EF-hand_6
EF-hand_1
EF-hand_8
EF-hand_5
Motif
Other DBs
NCBI-GeneID:
17875882
NCBI-ProteinID:
XP_006281535
UniProt:
R0GTC8
LinkDB
All DBs
Position
Unknown
AA seq
538 aa
AA seq
DB search
MDIDGVNDVQILDHELLQLPGLSPVSLKANPHIAEELFSQWLSLPETGRLVKSLIDDTKS
STPGSVSKNCTNLSVACGSALPSVFLNSGTPPLSPRGSPGSPRFSRQKTSPSLQSPLKSV
REPKRQLIPQFYFQHGRPPAKELREECISMVDQCFNNYIDGAHMDEFKSITKEVCKLPSF
LSSVLFRRIDTSCSGIVTRDAFIKYWVDGNMLAMDVASQIYNILRQPGCKYLRQADFKPL
LDELLTTHPGLEFLRNTPEFQERYAETVIYRIFYYINRSGTGCITLRELKRGNLIAAMQQ
VDEEDDINKVIRYFSYEHFYVIYCRFWELDGDHDFLIDKENLIKYGNHALTYRIVDRIFS
QVPRKFTSKVEGKMSYEDFAYFILAEEDKSSEPSLEYWFKCIDLDGDGVITPNEMQFFYE
EQLHRMECITQEPVLFEDILCQIFDMIKPEKENCITLQDLKASKLSGNIFNILFNLNKFM
AFETRDPFLIRQERENPTLTEWDRFAQREYVRLSMEEDVEEVSNGSADVWDEPLESPF
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggatatcgatggtgtaaacgatgttcagattttggatcatgagctcttgcagcttccg
ggtttgtctcctgtatcgctcaaagctaaccctcatattgctgaggaactcttctctcag
tggctttcactccctgaaactggccgattggtcaagtctttgatcgatgatactaaatct
agcaccccaggcagtgtatccaagaattgtaccaatctcagcgttgcttgcggaagtgca
ttgccatctgtgtttctgaacagcggcactcccccactatccccacgaggctcacctggg
tctcctcgtttctcaaggcaaaagacaagcccttctctacagtctcctctgaaatcagtc
agggaaccaaagcgccaactcattcctcagttttacttccaacatgggcgtccacctgcg
aaagaattaagggaggaatgtatatccatggttgatcaatgttttaataactatatagac
ggagctcatatggatgaattcaaatccattactaaagaagtgtgcaagctgccttctttt
ctttcttctgtactatttagaaggatagatacgagttgctccggtatcgttacaagggat
gcatttatcaagtattgggttgatggaaatatgttggcaatggacgtagcctcacagata
tataatattttaaggcagccaggttgcaagtaccttagacaggctgacttcaaaccactt
cttgatgagcttctgacaactcatccaggcctggaattcctcaggaatacacctgaattt
caagaaagatatgctgagactgtcatctacagaatattttactacataaacagatcaggt
actggttgcattactcttagagagctgaagcgtgggaatcttattgctgccatgcaacaa
gttgacgaagaagatgacatcaataaagttattaggtacttctcctatgagcatttctac
gttatatactgcagattttgggaactcgatggcgaccatgatttccttattgataaggaa
aacctcatcaaatatggtaatcatgctcttacctacaggattgtcgacagaatattttca
caggtccctaggaaatttacgagcaaagtcgaggggaagatgagttatgaagattttgca
tacttcattcttgctgaagaggataagtcatctgagcctagtcttgagtattggttcaag
tgcatagaccttgatggagatggggtgatcactcccaacgaaatgcagtttttctacgaa
gagcagcttcatcgcatggaatgtataacccaggaacctgtactgtttgaagatatccta
tgtcaaatatttgacatgattaaaccagagaaggagaactgcatcacactccaagatctg
aaagcatctaaactttctggaaatattttcaatatactcttcaatctgaacaaattcatg
gcatttgaaactcgtgacccatttcttattcgccaggaacgcgagaatccaacactgaca
gaatgggaccgatttgctcagagagagtatgtgcggttgtcaatggaggaagatgtggag
gaagtctcgaatgggagtgcagatgtttgggacgaaccactcgaatctccattttaa
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integrated database retrieval system
