Capsella rubella (pink shepherd's-purse): 17875981
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Entry
17875981 CDS
T02984
Name
(RefSeq) THO complex subunit 5B
KO
K13174
THO complex subunit 5
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
17875981
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crb03019
]
17875981
03041 Spliceosome [BR:
crb03041
]
17875981
Messenger RNA biogenesis [BR:
crb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
17875981
Spliceosome [BR:
crb03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
17875981
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
17875981
NCBI-ProteinID:
XP_006280019
UniProt:
R0EUV9
LinkDB
All DBs
Position
Unknown
AA seq
824 aa
AA seq
DB search
MEDGEIEEGMVTADETPTPEVTTTTETTQPPREPGKSPLELLRESKTSVEEIVAKMLSMK
KEGNHKSEIQELLTQMFLNFVNLRQANRAILTEEDKVKAETERAKAPVDFTTLQLHNLMY
EKSHYVKAIKACRDFKSKYPDIDLVPEQEFFRDAPEAIKDQSQSSDSSHVLMPKRLNFEL
HQRKELCKHRARLEQKKKSLLETIAERKKFLSSLPLHLKSLKKASLPVQNQLGIHHTKKL
KQHNLAELLPPPLYVLYSQLLAQKEAFEESIDLEVVGSLKDAQAYARQQSKKDSGMLNNT
ESSRLEDDGPDDDDDGQRRRKRPKKLTSKEGSDKAGLYQAHPLKIFLHIYDEEMPDAKSF
KLVILKFEYLLKLNVVCVGAEGSQDGPEKNIFCNLFPDDAGLEPPHQSTKLILGDGQAFD
ENRTSRPYKWVQHLAGIDILPELSPVLLGEEAHNSDSAKSDALVPNLSLYRQQHRVKTVL
QRIRSRKKAHLALAEQLDLLMKHELPVVKCEDAPWALHKVLCALDSWLHIQSSASKSCSL
SLNGAEQVPEPMEIDVDGRSTSGKEDLESIREDGELPSLVTAAASLTSSNHTPLKVSNQA
RSRQLALMTKNLDSSISKGRSPSFKKYEDDLDLVLDDDSEVDEPAGRTESHVEALCPEKA
DNSWVDYGAREFVLVLSRKTDGGKLWKLEATVYISMEYPLRPPLFSLSLHASSSSGNDNG
TNESDHYNELRAMEAEVNLHMLKIIPSDQENYLLSHQVRCLAMLFDYYMEDPSPDSKRGT
ATTVVDVGLCKPVDGKLLVRSFRGRDHRKMISWKGRGCASGYPC
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atggaagacggcgaaatagaggaaggaatggtgaccgccgacgaaaccccgacgccggaa
gtaacgacgacgacggagactacacaaccaccgcgagaaccaggcaaatctccactcgag
ttactccgagagagcaaaacctccgtagaagaaatcgtcgcgaagatgctctcaatgaaa
aaagaaggaaatcacaaatccgagattcaagagctcctcacacaaatgtttctcaacttc
gtcaatcttcgtcaggcgaatcgtgcgattctgactgaggaagataaggtcaaagcggag
acggaacgagctaaagcaccggttgatttcacgacgttgcaattgcataatcttatgtat
gagaagagtcattacgttaaagctattaaggcttgtagagatttcaaatcaaagtatcct
gatattgaccttgttcctgaacaagagttctttcgagatgctcctgaagctattaaagat
caatcacagtcaagtgatagttcacatgttttgatgcctaagagactcaattttgagctt
catcagaggaaagaattgtgtaagcatcgagcgagattggagcaaaagaagaagagttta
ctagaaactattgcagagcgtaagaagtttttgtcaagtcttcctctacacctcaagtct
ctgaagaaagcatcgcttccagtacagaaccagttgggtatacatcacaccaagaaactg
aagcagcataatctagctgagttgcttcctcctccgctttatgttctatactcacagctc
ttggcacaaaaggaagcttttgaagagagcattgatttggaggtagttgggagccttaag
gatgcacaagcttatgctagacaacaatcgaaaaaggactcaggtatgttgaataataca
gagagttctaggttggaggacgatggaccagatgacgatgatgatggacaaaggagaaga
aaacgacccaagaagcttactagcaaagaaggttctgacaaggcaggattatatcaagcc
caccctctcaaaattttccttcacatatatgatgaggagatgcctgatgcaaaatccttc
aaacttgtcattctcaagtttgagtacttgctgaagttgaatgttgtatgtgttggtgcc
gaaggctctcaggatggaccagagaaaaatatcttttgtaacttatttccagatgacgct
ggacttgagcctcctcatcaatcaaccaagctcatccttggtgatggtcaggcatttgat
gagaacagaacttcaaggccttataaatgggtacagcatttggcgggaattgatatttta
ccagaactgtcacctgttttactaggcgaagaagctcataacagtgactcagctaaaagt
gatgcgcttgtgcctaatctttcattgtatcgccagcagcatagggtgaaaacagttctg
caaagaatacgctcgaggaaaaaagcacatctggctcttgcggaacagcttgatttactt
atgaaacatgagttgccagtggtgaagtgcgaagacgctccttgggcacttcataaggtt
ctctgtgctttggattcctggttacatatacaatcttcagctagtaagtcatgctctctg
agtctgaacggtgcggaacaagttccagaacctatggaaatcgatgtagatggaagatct
acttctggaaaggaagatcttgaaagtatacgagaagatggagaacttccctctttggtc
acagcggcagcttctttaaccagttcgaaccataccccattgaaggtatctaatcaagca
cggtcaaggcagttggccttgatgacaaagaacctagattcttcaattagcaaaggaagg
tcaccaagtttcaagaaatatgaagatgatttggatcttgttttggacgatgatagtgaa
gtagatgagccagccggaagaactgagtcgcatgtggaagctttgtgccctgagaaagct
gataattcatgggtggattatggtgcgagagagtttgtgcttgtgttgtccaggaaaaca
gatggtggaaagttgtggaagttagaagctacggtctatatcagcatggaatatcctctt
cgacctcctttgttttctctgtctctccatgcttcttcctcgtcaggaaatgacaatggg
accaatgaaagtgaccattacaatgaacttcgagccatggaagcggaagtgaaccttcat
atgttgaagattattccttcagatcaagaaaactatctcctatctcatcaagtcagatgc
ttagcaatgttgttcgactattacatggaagacccatctccagattccaaaagaggaaca
gccacaacagtggttgatgttggtttgtgtaagcctgtagatggtaagcttcttgtgaga
tcattcagaggcagagatcaccggaaaatgatctcatggaagggcagaggatgtgcatca
ggttatccgtgctag
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integrated database retrieval system
