KEGG   Capsella rubella (pink shepherd's-purse): 17876004
Entry
17876004          CDS       T02984                                 
Name
(RefSeq) DNA-directed RNA polymerase subunit 5-like protein 1
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
crb  Capsella rubella (pink shepherd's-purse)
Pathway
crb03020  RNA polymerase
crb03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:crb00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    17876004
  09124 Replication and repair
   03420 Nucleotide excision repair
    17876004
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:crb03021]
    17876004
   03400 DNA repair and recombination proteins [BR:crb03400]
    17876004
Transcription machinery [BR:crb03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     17876004
  RNA polymerase III system
   RNA polymerase III
     17876004
  RNA polymerase I system
   RNA polymerase I
     17876004
DNA repair and recombination proteins [BR:crb03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      17876004
SSDB
Motif
Pfam: RNA_pol_Rpb5_N RNA_pol_Rpb5_C
Other DBs
NCBI-GeneID: 17876004
NCBI-ProteinID: XP_006281495
UniProt: R0GT69
LinkDB
Position
Unknown
AA seq 210 aa
MSDLDDEITRIFKVRRTVLQMLRDRGYTIEDSDLNLKREEFVQKFCKSMNRVNKEALFVA
ANKGPNPADKIYVFYPEGPKVGVPVIKKEVALKMRDDKVPRGIIVVPMPITGPARMAVLE
LNKILTIEVFEEAELVTNITEHKLINKYYVLDDQAKKELLKKYTVQDTQLPRILISDPLA
RYYGLKRGQIVKIRRSDVTSLDYYTYRYAV
NT seq 633 nt   +upstreamnt  +downstreamnt
atgtctgacttggatgatgagatcacgaggatttttaaggtgcgtcgcacggtgcttcag
atgctgagggatcgaggttacactatagaagattctgatttgaacttgaaacgagaagag
tttgttcaaaagttttgtaaatctatgaacagagtcaataaggaagctcttttcgtcgca
gccaataaggggccaaatccagccgacaagatatacgtattctacccggaaggtcctaag
gtgggagtgccagtgattaaaaaggaagtggctcttaagatgagagacgataaagttcct
cgagggatcatagttgttccaatgcccataactggtccggccagaatggccgtattagag
ctcaacaagattctaacaattgaagtctttgaggaggccgaattggtgaccaacatcact
gagcataaactcatcaacaagtactatgtgctcgacgatcaagccaagaaggaactactc
aaaaaatacacagtgcaagacacacagttgcctcgcatcctcatctctgatcctctagcc
agatactatggacttaagcgaggacaaattgtcaagatcagacgaagcgatgttacttct
ctggactattatacctaccgatatgctgtttga

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