Capsella rubella (pink shepherd's-purse): 17876259
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Entry
17876259 CDS
T02984
Name
(RefSeq) heparanase-like protein 2
KO
K07964
heparanase [EC:
3.2.1.166
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb00531
Glycosaminoglycan degradation
crb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
17876259
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
crb00536
]
17876259
Enzymes [BR:
crb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.166 heparanase
17876259
Glycosaminoglycan binding proteins [BR:
crb00536
]
Heparan sulfate / Heparin
Enzymes
17876259
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_79n
Leu_Phe_trans
Motif
Other DBs
NCBI-GeneID:
17876259
NCBI-ProteinID:
XP_006281918
UniProt:
R0F0M4
LinkDB
All DBs
Position
Unknown
AA seq
539 aa
AA seq
DB search
MGGNVVFLISSMLLLLPITFASDMERAIMVIDGARRIAETDENFVCATLDWWPPEKCNYD
QCPWGYASLINLNLSSPLLAKAIQAFRTLRIRIGGSLQDQVIYDVGDLKTPCTQFKKTDD
GLFGFSKGCLYMKRWDELNHFFNATGAIVTFGLNALYGRDKSTGNAWGGDWDHSNTQDFM
NYTVSKGYAIDSWEFGNELSGTGIGASVSVELYGKDLIVLKDVIKKVYKDSRTKPLVVAP
GGFYEEKWYSELLRISGPGVLDVMTHHIYNLGPGNDPKLVNRILDPNYLSGISGTFANVN
RTIQENGPWAAAWVGEAGGAFNSGGRQVSETFINSFWYLDQLGMSSKHNTKVYCRQALVG
GFYGLLEKETFVPNPDYYSALLWHRLMGKGVLEVQTNASEYLRAYVHCSKGRAGITLLLI
NLSKQTTFTVGVSNGVKVVVQAESMKRKSFLETIKSKVSWVGNKASDGFLNREEYHLSPQ
DGVLRSKIMLLNGKPLVPTATGDIPDLKPVRQDVKSPVYVNPLSISFILLPTFDAPACS
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgggcggcaacgttgtgttcttgatcagtagtatgcttctactacttcccattactttt
gctagcgatatggaacgagccatcatggttattgacggtgcacgtcgaatcgctgagacc
gatgagaactttgtctgcgcaacgcttgattggtggccacctgaaaaatgcaactatgat
cagtgtccttggggttacgcctctctcatcaacttgaacttatcttctcctcttcttgca
aaagctattcaagcttttaggacgttgaggattagaataggtggttccttgcaagatcaa
gtgatttacgacgttggagacttgaagaccccttgcactcagttcaagaagactgacgac
ggattgttcggattctctaaaggatgtttgtatatgaaacgatgggacgaacttaaccat
ttcttcaacgcaaccggagctattgtgactttcggtttaaacgctctgtatgggagagat
aaaagcaccggaaacgcttggggaggggattgggatcatagtaacactcaggatttcatg
aactacacagtctcaaagggttatgctatagactcgtgggagtttggtaatgagcttagt
ggaaccgggattggtgctagcgtgagtgtagagctttacgggaaagacttgattgtactg
aaagatgttatcaagaaagtttacaaggattctcggaccaaacctttggttgtagctcca
ggtggattttatgaagaaaaatggtactcagagcttcttcgcatctctggaccgggtgtt
cttgatgtcatgactcatcatatatacaatcttggtccagggaatgatcctaagctagtg
aataggatactagatccaaattacttgagcgggatttcgggcacattcgcaaatgtaaac
cgaacaattcaagaaaatggaccttgggctgctgcttgggttggagaagccggaggagcg
tttaacagtggtggccgtcaggtttctgagacattcattaacagcttctggtacttagac
cagctcggtatgtcctcaaagcataacaccaaagtatactgcagacaagctttggtcgga
ggtttttacggtctgcttgaaaaggaaacgtttgttcccaatccagactactacagcgcg
cttctttggcaccgtttgatgggtaaaggcgttcttgaggttcagacaaatgcctcggag
tatctacgagcctacgttcattgctccaaaggaagagcgggaataacgctgcttctgatt
aatctgagtaagcaaacaacgtttacagtgggagtcagcaatggcgtgaaggttgttgtg
caagcagaatcgatgaagaggaaatccttcttggaaacaatcaagagcaaggtttcttgg
gtcggaaacaaggcttccgatggttttttgaacagagaagagtatcacttgagtccacaa
gatggtgtcttgcgtagcaagataatgctcttgaacggtaaacctttagtaccaacagcc
acgggagatatcccagaccttaagccagtcaggcaggacgtgaaatctccagtttatgtc
aatccgttgtcgatctcattcatcctgttgccgacctttgatgctcctgcctgttcttga
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