Capsella rubella (pink shepherd's-purse): 17876472
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Entry
17876472 CDS
T02984
Name
(RefSeq) pre-mRNA-processing factor 39
KO
K13217
pre-mRNA-processing factor 39
Organism
crb
Capsella rubella (pink shepherd's-purse)
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
crb03041
]
17876472
Spliceosome [BR:
crb03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
17876472
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
TPR_14
HAT_Syf1_CNRKL1_N
TPR_1
Mitofissin
Motif
Other DBs
NCBI-GeneID:
17876472
NCBI-ProteinID:
XP_006279931
UniProt:
R0G8F8
LinkDB
All DBs
Position
Unknown
AA seq
1036 aa
AA seq
DB search
MATTEVTTAVSDEEPLPPSPELDESSDFLDNDRLQETFCSGELDFDEWLLLISEIETSFP
DNVEKLCLVYDAFLLEFPLCHGYWRKYAYHKIKLCSLEDAVEVFERAVKSATYCVPVWLD
YCAFGVAAYEDPHDVCRLFERGLSFVGKDYSCYTLWDKYVEYLLDQKQWSSLAHVYLRTL
KYPSKKLDLYYKNFRKIAASLKETINCGIDVKGDLSSDPMEEDLVPTCHTDEEISIVVRD
FMGPSSSSVLSNALQKYLSIGEQFYQDSWQLMEKISYFETHICRPYFHINPLDTNQLDNW
HAYLSFAESYGDFDWAIKLYERCLIPCASYTEFWFRYVDFVENKGGRELANFALARASQT
FVKNASVIHLFNARFKEHVGDASAASVALSQCGVELGFGFVENVTKKANMEKRLGNFEAA
VTTYKEALKKTLIEKENLETTALLYVQFSRLKYMITNSAEDAAQILIEGNEKVPHCKLLL
EELIRLLMMYGGSRQVDLLDPIIDKEISHQADSSDCLSAEDKEEISNLYMEFIDLSGTIH
DVRKALGRHIKLFPHSARAKIHVPRPLGRSFRELIQRREKTLECLNQDLLTNKDISCTVD
PPPKEKKESSLDCDSPQSKGDYVNTEPNRDCLVSGHLVEGNDNVAAGENLCELQSDLSKG
LKADEGRERSREVSLPIQATPKHGFVTNQDHFSSSSVDNVKSDAIVIQPSGSRSPQSYQS
HQSQESLRLTGRNRYHRRDINQPQRESKPRSQERPPQMPYSTVRTGREILGQHMGVAPRD
NQAALQSSISQNPQNQLQNYQLQMHPVVQTSNAYPQTQILGQQHMIVSPPDSQNPQNQYQ
NSTPQVQTSYAYPQTQIPQNPVQSNYQQGQMQSHEAYNQMWQQYYYNYYYYHQQQQQQQQ
LMSGQPQPNQNPQPQLDQNLLQLLSKQYQSQAKTQYPQSQQVEQLNTQEQSQEPENQQQI
QFQQQQQQQQQEWYQQQQQYALYLHQQQLQGEVKGEEQQPSIPQQQVSTTNSDVQKSQES
GAVDEAYLSDTSISSI
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgacggaggtaacgaccgccgtctccgatgaggaaccattaccaccgtctcca
gaattagacgaatctagtgatttcctcgacaacgatagattacaagaaacattttgcagt
ggagaacttgattttgatgaatggcttttgttaatctccgaaatagagacttcgttccct
gataatgttgagaagctatgtttagtttacgatgctttcttgttggagtttccattgtgc
catggttattggaggaaatatgcttaccataagataaagttatgctctttagaagatgct
gttgaagttttcgaacgagctgtaaagtcagctacttattgtgtacctgtatggctcgac
tattgcgcgttcggtgttgctgcgtatgaagatcctcatgatgtttgtagattatttgag
aggggactttcatttgttggaaaagattattcttgctacactctttgggacaaatatgta
gaatatcttttggaccaaaagcaatggagttcactggctcatgtatatctccggaccctg
aaatatccgtccaagaagttggatctctattacaaaaacttcaggaagattgcggcttct
ttgaaagagacgattaattgtggaattgatgttaaaggagacctttcctcagaccccatg
gaagaagatttggtccctacatgtcacactgatgaggagatctctattgttgtaagagac
tttatgggcccttcctctagctcagttttgtcaaacgcactgcaaaaatatttgtcaatt
ggggaacaattctatcaagattcatggcagttgatggagaaaataagctactttgagaca
catatctgcaggccttattttcatataaatccattggacactaatcagctggacaattgg
catgcatatttgagcttcgccgaatcatatggagactttgactgggctattaagctttat
gagagatgcttaataccatgcgctagttacacagagttctggttccgctatgtggatttt
gtagaaaacaaaggtggaagggagctagcaaactttgcattggctcgagcttcacagact
tttgtcaagaatgcatctgttatccatctattcaatgcaagatttaaggaacatgttgga
gatgcatctgctgcttcagtggctctttcacaatgtggtgtggaactgggtttcggtttt
gttgaaaatgtaactaagaaggctaacatggaaaagcgcctgggtaattttgaagctgct
gttactacgtacaaagaagctctgaagaaaacactcattgaaaaagaaaatttggaaaca
accgcactgctgtatgttcaattttctcgccttaagtacatgattacaaatagtgctgaa
gatgcagctcagattctgatagaaggcaatgagaaagttccccactgcaaattacttctt
gaggaacttataagactcttaatgatgtatggagggtctcgacaagtggatttgctagat
cctatcatagataaagaaatatctcaccaggcagattcttctgattgtctgagcgcagag
gacaaagaggagatatcaaatttatacatggagtttattgatctctctggaaccatccat
gatgtgcggaaggctttgggtcgacacataaaattattcccacattctgctagagcgaag
atacatgtgccccgtcctttaggaagatcatttagagagttgattcagagaagagagaag
actcttgagtgcttgaatcaggacctattgacaaacaaagacattagctgcacagtcgat
ccgccaccaaaagaaaagaaagaatcatctctagactgtgatagtccccaatctaaaggt
gactatgtaaacactgagcctaatcgggattgcctggtttcaggacatcttgttgaagga
aacgataatgttgctgcaggggagaatttgtgtgagttacagagtgatctgtccaaggga
ttaaaagccgatgaaggtcgcgaacgctctcgtgaagttagcctacctattcaagccaca
ccaaaacatggttttgtcactaatcaagatcacttctcttccagttcagtagataatgtg
aaatcagatgctatagtgatccaacctagtggctcacggagtccccaaagttaccaaagt
caccaaagtcaagagtctctcaggctaactggtcggaacaggtaccaccgaagagatata
aatcagcctcagagagaatcaaaacctcgttctcaagagagacctcctcagatgccgtat
tctacagtcagaactggtcgtgaaattctaggtcagcacatgggtgttgctcctcgagac
aatcaagccgcgctacaaagctcaatctcacagaatccgcaaaaccaattacagaactat
caacttcagatgcatcctgtggttcaaacatccaatgcttatcctcaaactcagatactt
ggtcagcagcacatgattgtatcccctccagattcacagaatccgcagaaccaatatcaa
aactctacacctcaggttcaaacctcctatgcttatcctcaaactcagattcctcagaat
ccagtgcaaagtaactaccaacaaggtcagatgcagagtcatgaagcttataaccagatg
tggcaacagtattattataattattattactaccatcaacaacaacagcaacagcaacag
cttatgtctggacagccacaaccaaatcagaaccctcagccacaacttgatcagaatctt
ctgcaacttctctccaaacagtatcaatctcaagccaaaactcaatatccacaatctcaa
caggtggaacagctcaatacacaggaacagagccaagaaccagaaaatcagcagcaaatt
cagttccagcagcaacaacaacaacaacaacaagagtggtaccaacagcaacaacaatat
gctttgtatcttcatcaacagcagttgcaaggagaagtaaaaggcgaggaacaacaaccc
tctataccacagcaacaggtctccacaacaaacagtgatgttcaaaagagtcaagaatct
ggagcagtcgatgaagcatatctatctgacacttccatcagttctatatga
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integrated database retrieval system
