Capsella rubella (pink shepherd's-purse): 17876719
Help
Entry
17876719 CDS
T02984
Name
(RefSeq) indole-3-acetic acid-amido synthetase GH3.6
KO
K14487
auxin responsive GH3 gene family
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
17876719
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GH3
GH3_C
GH3_M
Imm63
Motif
Other DBs
NCBI-GeneID:
17876719
NCBI-ProteinID:
XP_006280192
UniProt:
R0GLB3
LinkDB
All DBs
Position
Unknown
AA seq
613 aa
AA seq
DB search
MPEAPKIVASSDVSDESLAEKNKNKLQFIEDVTTNADDVQRRVLEEILSRNADVEYLKRH
GLQGRTDRETFKHVVPVVTYEDIQPEINRIANGDKSQILCSNPISEFLTSSGTSGGERKL
MPTIEEELDRRSLLYSLLMPVMNQFVPGLDKGKGMYFLFIKSESKTPGGLPARPVLTSYY
KSSHFKNRPFDPYTNYTSPNQTILCPDSYQSMYSQMLCGLCQHKEVLRVGAVFASGFIRA
IKFLEKHWPELARDIRTGTLSSEITDLSVREAVGEILKPDPKLADFVESECRKTSWQGII
TRIWPNTKYVDVIVTGTMSQYIPTLDYYSNGLPLVCTMYASSECYFGVNLRPLCKPSEVS
YTLIPNMAYFEFLPVHRNSGVTSSISLPKALTEKEQQELVDLVDVKLGQEYELVVTTYAG
LYRYRVGDVLSVAGFKNNSPQFSFICRKNVVLSIDSDKTDEVELQNAVKNAVTHLVPFDA
SLSEYTSYADTSSIPGHYVLFWELCLNGNTPIPPSVFEDCCLTIEESLNSVYRQGRVSDK
SIGPLEIKIVESGTFDKLMDYAISLGASINQYKTPRCVKFAPIIELLNSRVVNSYFSPKC
PKWVPGHKQWGSN
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaggcaccaaagatcgtagcttcttccgatgtttctgatgagagcctcgctgag
aagaacaagaacaagcttcagttcattgaggacgtgaccactaacgctgatgatgtccag
agacgagttcttgaagagatcctttcacgtaatgctgacgtggagtacctcaaacgacac
gggctccaaggacgaaccgaccgtgagacattcaaacacgtcgtgcctgtcgtaacttac
gaagacattcaacctgagatcaacagaatcgctaatggtgacaaatcccaaatcctctgt
tctaaccccatctctgagttcctcacaagttctgggacatctggtggagagaggaaactg
atgccaacaatcgaagaggaactagacaggagatcacttctctacagtctcttgatgcct
gtgatgaaccagtttgttcctggtcttgacaaaggcaaaggaatgtactttctcttcatc
aaatccgagtccaagacaccaggtggtctccctgctcgtcctgttttaaccagttactac
aaatcttctcacttcaagaacagaccttttgatccttacaccaactacaccagccccaac
caaaccatcctttgtcctgactcttaccagagcatgtactctcaaatgctttgcggttta
tgccaacacaaagaggttcttcgtgttggagctgtctttgcctctggtttcatcagagcc
atcaagtttcttgagaaacattggcctgagctagcccgtgacattagaaccggtactctc
agctccgagattactgatctttcggttcgtgaggctgttggggagattcttaaaccggat
cctaagcttgcggatttcgtcgaatctgaatgcaggaagacctcttggcaagggatcatc
actaggatttggccaaacaccaagtatgttgatgtgattgtgactggaacaatgtcacag
tatattccaactctggattattacagcaatggtttgcctctagtctgcacaatgtatgct
tcttcggagtgttactttggtgtgaatctcagaccactctgcaaaccaagcgaagtctct
tacactctcataccgaacatggcttatttcgagttcttgcctgttcataggaacagtgga
gtcactagctcaatcagtcttccaaaagcacttactgagaaagaacagcaagagcttgtt
gatcttgttgatgtcaagcttggtcaggagtacgagcttgtagtcaccacctatgctgga
ctttacagatacagagtaggtgatgtcctaagcgtggctggtttcaagaacaattcgcct
cagttcagcttcatatgccgcaagaacgttgtcctaagcattgactctgacaaaaccgat
gaggttgagcttcaaaacgctgttaaaaacgcggtaacacaccttgttccgtttgatgcc
tcactctccgagtacactagctatgcggacacatcatctatccctggccactacgtcttg
ttctgggagctctgcttgaatggtaacacgccaatccctccctcggtcttcgaggattgc
tgcttaaccatagaggaatcactaaacagtgtgtatagacaaggaagggtcagtgacaag
tccattggaccgttggagatcaagatagtcgagtcagggactttcgataagctcatggat
tacgcgataagcttaggggcatctatcaatcagtacaagacaccaaggtgtgtgaagttt
gctcccatcattgagcttttgaactctagggttgttaatagttacttcagccccaagtgt
cctaaatgggtacctggccacaagcaatggggaagtaactaa
DBGET
integrated database retrieval system
