Capsella rubella (pink shepherd's-purse): 17876813
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Entry
17876813 CDS
T02984
Name
(RefSeq) protein CHROMATIN REMODELING 4 isoform X1
Organism
crb
Capsella rubella (pink shepherd's-purse)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Chromo
HDA2-3
PHD
ResIII
DUF1087
PHD-1st_NSD
HTH_CHD1_Hrp3
Chromo_MIT1
PHDvar_NSD
zf-HC5HC2H
zf-UBR_1
SnAC
Motif
Other DBs
NCBI-GeneID:
17876813
NCBI-ProteinID:
XP_006279554
UniProt:
R0ETR9
LinkDB
All DBs
Position
Unknown
AA seq
2223 aa
AA seq
DB search
MKDSGSEMINRDWVMKQKRRKLPSILDLLDQKVESSVAFDSPEYTSSAKPTKHRLRTDST
PERNSSKRKGNDGNYFECVICDLGGDLLCCDSCPRTYHTECLNPPLKRIPNGKWICPKCS
PNSEALKPVNRLDAIAKRARTKTTKRNSQAGPKCERASQIYCSSIVSGEQTSEKGKSVSA
EESKSVGKEVYSPPMDGCSTAELGHASADDRPDSSSHGEDDLGKPVVPTADPPSDAGLTL
MSCEDLSESKLSDTEKNHEASVKKLDPASSEIVENNTTAEVETGKGKRKKRKRELNDGES
LERCKSEKKRSKKSLSKVDSQSTKSPESSKKKKKKKKNRVTLKSLSKSPSKTEIPEKVKK
LSKEERRAIRDTNKSSSYLDDKNSLPAGNLQVDRVLGCRIQGLTNTSLSSALSDDLCSDN
LQANDQRDSSVPNSNAGLVVAEDRTDSSSETGKSPSYSHLKDKDMDESALGTEGMVEEKE
EMHSEDNSDATLSRHVDNEDMKVSGTLLSAERELLEEAHQETGEKCTTAGEEVEEPVAAK
TSDVIGETVSYEFLVKWVGKSNIHNTWISEAELKGLAKRKLENYKSKYGTTVINICEDKW
KQPQRIVALRVSKEGNQEAYVKWTGLAYDECTWESVEEPILKSSSHLIDLFHQYEQKTLE
RSSRGNPTRERGEGQQSEIVTLTEQPQELRGGALFPHQLEALNWLRRCWHKSKNVILADE
MGLGKTVSASAFLSSLYFEFGVARPCLVLVPLSTMPNWLSEFSLWAPLLNVVEYHGSAKG
RAIIRDYEWHAKNPTGTTKKPTSYKFNVLLTTYEMVLADSSHLRGVPWEVLVVDEGHRLK
NSESKLFSLLNTFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPSSFPSLSSFEERFHDLTS
AEKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELTSIQAEYYRAMLTKNYQILRN
IGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPESGSLEFLHDMRIKASAKLTLLHSMLKV
LQKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTFERVDGSVAVADRQAAIARFNQDKNRF
VFLLSTRACGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASV
EERILQLAKKKLMLDQLFVNKSGSQKEFEDILRWGTEELFNDSAGENKKDTSESNGNIDV
IMDLESKSRKKGGLGDVYQDKCTEGNGKIVWDETAIMKLLDRTNIQTVSTDAADTELEND
MLGSVKPVEWNEEIAEEQVEAESPALVTDDADEQSSERKDDDVVTCTEENEWDRLLRMRW
EKYQSEEEAALGRGKRLRKAVSYREAYAPHTSGPVTESGGEEEKEPEPELKKEYTPAGRA
LKEKFAKLRERQKNLLAKRNSVEDSLPNGNEDQVTEAANQDEESPMSMDLDDSRASQQCD
AQKRKAGSLRLDSSSDPKPELPIQHHHGAECLPSLNPNNLPVLGLCAPNFTHSESSRRNN
SRPGSRQNRSITGPHFPFNLPQTSNLVEREANDQEPSLSRLKPQNVKEESYQQPLGNMDG
WLPHRQFSPSGDFERPRSSGAALTDFQEKFPLLNLPFDDKLLPRFPFQPRSMGTSHQDIM
ANLSMRKRFEGTGHSMQDLFGVPSMPFLPNMKIPPMDPPVFGHQEKELPPLGLDQFPSAL
QSIPENHRKVLENIMLRTGSGIGHLQKKKTRVDAWSEDELDSLWIGIRRHGYGNWETILR
DPRLKFSKYKTPEYLAARWEEEQRKFLDSLSSLPSKSSRTDKSTKSSLFPGLPQGIMNRA
LHGTKYATPPRFQSHLTDIKLGFTDLASPLPLFEPSDHLGFRSEPFPPMANLCTDNLPGD
PSAGPSERPGTSTNIPSEKPFPLNSLGMGNLGSLGLDSLSSQRADEKRDAIKRGKLPLFL
DMPLPPMLDSSNNVFLGRSANQSFHNPNRGLNLSNPMGKDILGISSSENKLPHWLRDVVT
VPIVKSPEPPTLPPTVSAIAQSVRVLYGKDSTTIPPFVIPDPPPPAPRDPRHSLRKKRKR
KLHPLSQKTTDIGSSSHNAVESSQGNPLTSSTPPLPPPSLSSETSGSSQPNLPPHNLNST
EPLSSEATRLPPPEEDSVVAATPSEAPGPSLEGITGTTKSISLESKSSEPKSTNQHGDLD
PETDEKIESDRTPLQSDKPLDEKREEQESENAKQCEPIEAESQNTNAEEESMKMVSDNAP
GDD
NT seq
6672 nt
NT seq
+upstream
nt +downstream
nt
atgaaagattcaggcagtgaaatgattaatagagattgggtcatgaagcagaaaagaaga
aaacttccttcaatactggatttattagaccaaaaagtggaaagttcagtggcttttgat
tctccggaatacacttcttccgctaaaccaactaagcatcggcttaggactgattcaact
cctgaaaggaattcctctaagaggaagggaaatgatgggaattattttgaatgtgtgatc
tgtgaccttggtggtgatttgttgtgctgtgatagttgtcctcggacctatcatactgaa
tgcctcaatccacctcttaagcggattccaaatggtaagtggatctgccctaaatgttcc
ccaaacagtgaagcactcaagcctgtcaatcgtttagatgctattgctaagcgtgcgaga
acaaaaactacgaaaagaaattctcaagccggaccaaagtgcgagagagcttctcagatt
tattgcagttctatagtttctggagaacaaacttcagagaaagggaaatctgtatcggct
gaagagagcaaatccgtaggaaaggaagtttattcacccccaatggatggttgttcaact
gctgagcttggtcatgcatctgcggatgaccgacctgattcatcgtctcacggagaagat
gatctgggaaaacctgtcgtacccactgcagatccgccttctgatgcaggattaactttg
atgtcctgtgaagatctctctgaatctaaactatcagatacagagaaaaaccatgaagca
tctgtgaagaagttggatcctgcttccagtgagattgtagaaaacaatacaactgctgaa
gtggagactggaaaaggtaaaaggaaaaaacgaaaacgtgaattaaatgatggggaaagt
cttgaaaggtgcaagtctgaaaagaaacgctcgaagaaaagtttgtccaaagtggattct
cagagtaccaaatcaccagagtcttcgaaaaagaagaaaaagaaaaagaaaaatcgcgtg
actttaaaatccctgtccaaatctccgtccaagaccgaaataccagaaaaagtgaagaag
ctttccaaggaggaacgacgtgcaatacgtgacacaaataaatcttctagttatttggat
gataaaaactctcttcctgctggaaacctccaggttgatcgtgtcttaggatgccgaatc
caaggtctgactaatacctcactgtctagtgctctgtcagatgacttgtgttctgataat
ttacaagctaatgaccagcgggatagctcagtaccaaattcaaatgctggattagtagtt
gctgaggacaggacagattcttcttctgagacaggtaaaagtcccagctattcacatctg
aaggataaagatatggatgaatctgctttaggtactgagggtatggttgaggagaaagaa
gagatgcattcagaagacaattctgatgccacattgagtagacatgtggataatgaagat
atgaaagttagtggaacacttctatctgctgagagagagttacttgaagaagcacatcag
gaaacaggggaaaaatgcactacggctggggaagaagttgaggagccggttgctgccaaa
acttcagatgttattggtgagactgtatcatatgagtttcttgttaaatgggtgggaaaa
tctaatattcataatacttggatttcggaggcggagctaaaaggtcttgctaagagaaaa
ctagagaactacaaatcaaagtacggaacaactgttataaatatctgtgaagataaatgg
aaacagcctcagcgaatagttgctcttcgggtttcaaaagaaggtaaccaagaagcttac
gtaaagtggacaggcttagcttatgatgaatgcacatgggagagcgtggaggagcctatt
cttaaaagttcatcccatttgatagatctttttcatcagtatgagcagaaaacattggaa
aggagtagtaggggtaatcccacaagggaaaggggtgagggtcagcaaagtgaaattgtt
accctcacagaacaacctcaagagctcagaggaggtgctttgtttccccatcagcttgag
gccttgaattggctgcgtagatgctggcataaatcgaaaaatgtaatacttgctgatgag
atggggcttggaaaaacagtgtctgctagtgcattcctctcctctctttattttgaattt
ggagttgccagaccttgtttagtcttggttccactttcaacgatgccaaactggctatct
gagttttctctttgggctccgctccttaatgttgtggagtatcatggaagcgcaaaagga
cgagccataattcgagactatgagtggcatgctaagaatcctactgggacgaccaagaag
ccgacatcctacaaattcaatgtccttttaactacttatgaaatggttttggctgactca
tctcatctacgtggagttccatgggaagttcttgtggttgatgaagggcatcgtcttaag
aattcggaaagtaagctgtttagcttgctcaacacattctcttttcaacaccgtgtgctt
ttgactggcacccctcttcagaataacattggtgagatgtataatctgcttaacttcttg
caaccatcttcattcccttctttgtcttcttttgaggagaggttccatgatttgacaagt
gctgagaaagtagaggaactgaagaaacttgttgctcctcatatgcttcgtcgtcttaag
aaagatgccatgcaaaatattcctccaaagacagagaggatggtccctgtcgagttgaca
tcaatccaggcggaatattatcgtgcaatgctaactaagaactatcagatactacgaaat
atcgggaaaggggtagcgcaacaatcaatgcttaacatagtgatgcagctgagaaaggtt
tgcaatcacccatatctcataccaggtactgagccggagtctgggtcactggagtttctt
catgatatgcggataaaagcgtcagctaagttgactctgttgcactccatgcttaaggtg
ctacagaaggaaggccatagagttctgatattttcacagatgacaaagcttctagacatt
ctggaggactacctcaatatagaatttgggcctaagacatttgaaagggtggatggttct
gttgctgtagcggatcgtcaggcagctatagcacgtttcaaccaagacaaaaatcggttt
gtttttctgttatcaacacgtgcctgtggtcttggtatcaatctggcaacggctgatact
gttattatctatgactctgatttcaacccccacgctgacatccaagctatgaatagagct
catcgaatcggacaatccaaacgacttttggtatacagacttgtcgtccgtgctagtgtt
gaagagcgcattttgcagctggcaaagaagaagttgatgctcgatcagctttttgtaaac
aagtctggatcccagaaggaatttgaagatattctacgctgggggactgaagaacttttc
aacgactctgctggtgagaataagaaagatacatctgaaagtaatgggaacatagatgta
atcatggatttagaaagtaaaagtaggaaaaaaggtggcctcggagatgtttatcaagac
aaatgtacagaaggaaatgggaagattgtttgggatgagactgcaattatgaagttgctt
gaccgaacaaatattcaaacggtctccactgatgctgctgatactgagttggagaatgat
atgctcggctccgtaaagcctgtggaatggaatgaggaaatagctgaagaacaagttgaa
gctgaatcacctgctctggtgactgatgatgctgatgaacagagttcagagagaaaagat
gatgatgttgtaacttgtactgaagaaaacgaatgggacaggcttctgcgtatgaggtgg
gagaaatatcagagcgaggaagaagcggctcttggtagagggaagcgtttaagaaaggct
gtttcatacagggaagcatatgccccacataccagtggacctgttactgagagtggtggt
gaagaagagaaagaaccagaaccagaacttaagaaggaatatacacctgcagggcgagcg
ctgaaagaaaagtttgccaagctgcgagaaaggcaaaagaacctgcttgcaaaaaggaat
tctgttgaagattctcttcctaatggcaatgaggatcaggtaactgaagcagctaatcag
gacgaagaaagccctatgtcaatggacttggacgatagcagagccagccagcaatgtgat
gcacagaaaagaaaagccggttcgctaagactagacagttcttcagatcctaaaccagaa
cttccaatccagcatcatcatggcgcagaatgtctgccatctttaaatccaaacaacttg
ccagttcttggactgtgtgctcctaattttacccattctgaatcctcccggagaaataat
tctcgtccaggtagtagacagaacagaagcataacaggaccccatttccccttcaatcta
ccccaaacgtcgaacttggttgagagggaagcaaatgaccaggaaccttctttgagtaga
ctaaaaccacagaacgtaaaggaagaatcttatcagcaacctcttggtaatatggatggg
tggcttccacatcgtcagttttcgccatcaggggattttgagcgtccccgaagttctggt
gctgctttgaccgatttccaggagaagtttccgctactgaaccttccatttgatgataag
ctgcttcctcgatttccattccagccgagatccatgggaacatcgcatcaagacatcatg
gccaatctttcgatgaggaaaagatttgaaggtactggtcattctatgcaagacctattt
ggcgtaccatcaatgccgtttctacccaatatgaaaatacctcctatggatccacctgtc
ttcggccatcaagagaaggaattaccgcctttgggtttggatcagtttccatcagctctt
cagtctatccctgagaaccatcgcaaggtgctggaaaatataatgctaagaactggttct
ggaattgggcacttacagaaaaagaagacaagagtagatgcatggtccgaggatgaacta
gattctctctggattgggattcgcagacatgggtatggaaactgggagacaattcttaga
gatccaaggctaaaattttcgaaatataaaacaccggagtacttggcagcaaggtgggaa
gaagagcaacgtaaattcttggatagtctttcatctctgccatctaaatcaagcagaact
gataagtccaccaaatcttccttgtttcctggtcttccccagggaataatgaatcgggct
ttacatggaactaaatatgccactcctccaaggttccaatcccaccttacagatataaaa
cttggattcaccgatctagcatctccccttccgttatttgagccatctgaccacctggga
tttcgaagtgagccttttcctcccatggcaaatctgtgcactgacaatcttcctggggat
ccttctgctgggccatctgaacgaccagggacgtcgacaaatattcccagtgagaagcct
tttccactcaactctcttggaatgggcaacttaggttcattgggtttggatagtttaagt
tcccagagagcggatgaaaaacgggatgctattaagcgtgggaaactgccgttgtttcta
gatatgccgttacctccaatgcttgattcaagcaacaatgtgttcttgggaagatcagcc
aatcaatctttccataatccaaatcgagggttaaatctctccaatcctatggggaaagac
atattgggaattagctcttcagagaacaagctacctcattggttacgggatgttgtgact
gttcctattgtgaagtcacctgaaccaccgactctacctccaactgtgtcagctatagct
caatcagtccgcgttttatatggtaaagattcgaccaccattccaccgtttgtgatacca
gacccgccgcctcctgctcctagagatcccagacacagtctgcgtaagaaaaggaaacgt
aaattgcatccattgagtcaaaagactacagacattggtagtagcagccacaatgctgta
gaaagctctcaaggcaacccactaacatcatcaactcctcccttgcctccaccatctcta
tcgagtgaaacttcagggtcttcccaacccaatttacctcctcacaacctaaacagcaca
gaaccactgtcctctgaggcaaccagattgccaccacctgaagaagattctgtggtagca
gcaacgccatctgaagcaccagggcctagtctagagggaatcactggtactaccaagtca
atttcgctagagagcaaaagctctgaaccaaaatctaccaaccaacatggagacttagat
ccagaaactgatgagaaaattgaatctgatcgaaccccacttcagtcagataagccttta
gatgagaaacgagaggaacaagaatctgaaaatgcaaagcagtgtgagcccatagaggct
gaaagtcaaaacaccaatgcagaagaagaatccatgaagatggtgtctgataatgctcct
ggtgacgactga
DBGET
integrated database retrieval system
