Capsella rubella (pink shepherd's-purse): 17876977
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Entry
17876977 CDS
T02984
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT5
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
17876977
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
crb04121
]
17876977
Enzymes [BR:
crb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
17876977
Ubiquitin system [BR:
crb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
17876977
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
DUF7567
zf-C3HC4_2
DZR
DNA_pol_B
FAIM1
Motif
Other DBs
NCBI-GeneID:
17876977
NCBI-ProteinID:
XP_006280840
UniProt:
R0GRB8
LinkDB
All DBs
Position
Unknown
AA seq
312 aa
AA seq
DB search
MVLMETDSIECAMENDEILHHKNKISSTKSQGGATVVISPATSVYELLECPVCTNSMYPP
IHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELPCKYYNLGCPEIFP
YYSKLKHESVCNFRPYSCPYAGSECPVVGDTSFLVDHLRDDHKVDMHSGCTFNHRYVKSN
PREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDEEDARNYTYSLEVGG
SGRKLSWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFSGGDRKELKLRVTGRIWKEQQN
PDSGVCIPNMCV
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggtgttaatggagacggatagtatcgaatgcgcgatggagaacgatgagattcttcat
cacaaaaacaaaatctcatcaaccaagtctcagggaggagccaccgtggtgatctctccg
gcgactagcgtttacgagctccttgaatgccctgtctgcactaattctatgtacccacct
attcatcagtgtcataatgggcatacgttatgctcgacctgtaaaacaagggtgcataat
cggtgtccgacttgtagacaagagcttggagatattagatgtttggctcttgagaaagtg
gctgagtcgcttgagctaccttgcaagtattacaatcttggatgccctgagatattccct
tattacagcaaacttaagcatgagtctgtgtgcaactttagaccttatagttgtccttat
gctggctcagagtgtcctgttgtaggagacaccagtttccttgtagatcatttaagagat
gatcacaaagtcgatatgcactctggatgtacgtttaaccaccgttatgtcaaatccaat
ccacgagaagtagagaacgcaacttggatgcttacggtatttcattgttttggacaatac
ttttgtcttcattttgaagcgtttcaactaggtatggctccagtatacatggcgtttctg
agattcatgggcgatgaagaagacgcacgaaactatacatacagcttagaagttggaggc
agtgggagaaaactctcatgggaaggaaccccaagaagcatcagagatagtcacaggaaa
gttagagacagtcacgacggtcttataatccaaagaaacatggcactcttcttctccggt
ggagataggaaagagctgaaacttagagtcaccggaagaatctggaaagagcaacagaat
ccagattctggtgtttgcataccaaacatgtgtgtgtag
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