Capsella rubella (pink shepherd's-purse): 17877024
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Entry
17877024 CDS
T02984
Name
(RefSeq) E3 ubiquitin ligase PQT3-like
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
crb04121
]
17877024
Enzymes [BR:
crb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
17877024
Ubiquitin system [BR:
crb04121
]
Ubiquitin ligases (E3)
U-box type E3
17877024
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DWNN
zf-CCHC_2
U-box
zf-C3HC4_2
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
17877024
NCBI-ProteinID:
XP_006279986
UniProt:
R0G8L0
LinkDB
All DBs
Position
Unknown
AA seq
888 aa
AA seq
DB search
MAIYYKFKSARDYDTVAMDGPFISVGILKDKIFETKHLGTGKDLDIVVSNAQTNEEYLDE
AMLIPKNTSVLIRRVPGRPRITVITTQEPRVENKVENVQAETTNIPVADPSAAKYPEDEW
DEFGTDLYSIPDAQEAQHIKPGPDLAPADEKVDEESKIQALIDTPALDWQRQGPDTFGAG
RGYGRGMTGRMNGRGFGMERKTPPPGYVCHRCNVPGHFIQHCPTNGDPNYDVKRVKPPTG
IPKSMLMATPDGSYSLPSGAVAVLKPNEDAFEKEMEGLPSTTRSVGELPPELKCPLCKEV
MRDAALTSKCCFKSFCDKCIRDHIISKSRCVCGETDVLADDLLPNKTLRDTINRILEAGN
DSTENAGSVGHIPGPKVLSPTTSVASKGEKKPALSNNNDASTIKPPMETAEITSAPRASA
EVNVEKPVDACESTQGSVIVKEATVSKLNTQAPKEEVQPQVAAGEPGKKKKKKPRVPGND
MQWNPVPDLAGPDYMMQMGPGPQYFNGMQPGFNGVQPGFNGVQPGFNGVQPGFNGFHPGF
NGFGGPFPGAMPPFMGYGLNPMDMGFGGGMNMMHPDPFMAQGFGFPNIPPPHRDLAEMGN
RMNLQRAMMGRDEAEARKAEMLRKRENERRTEGGKMFRDGENSRMMMNNNGTSASASSVN
PNKSRQAPPPPNHDYDRRRRLSPEHPPPRKIISPSRDSKRKSDRHPEERDGQRDRERSRH
QDLEREHDRTRDRRDEERSRHHRGDSERSQHQHRKRSEPRSSEPPATKAEMMIDNNSHKS
SVFARISFPEEETSSGKRRKVSSSSSASVTDPPAAVAVGTSVHRHSSRKEVEVADYESSD
EDRHFKRKPSRYERSPPVVVADVSEDKQHHHHHHRYSSKRGKGERSRP
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atggcaatttattacaagtttaagagtgcaagggattatgataccgttgccatggatggt
ccttttatatcagtcggtattctcaaagacaaaattttcgaaactaagcatttgggcact
ggtaaagaccttgatattgtcgtctccaatgcccaaactaacgaagagtatctggatgaa
gcaatgttaatcccaaagaatacatctgtcctcattcgtcgggttcctggacgccctcgc
atcactgttattactacccaagagcctagagttgagaataaagtggaaaacgttcaggct
gaaaccactaatattcctgttgccgatccatctgcagccaaatatcctgaagatgaatgg
gacgagtttgggactgatttatattcgattcctgatgcccaagaggcccagcatattaag
ccaggtcctgatcttgcaccagcagacgaaaaagtagatgaagaaagcaaaattcaggcg
ctcatcgacactccagcacttgactggcaacgacaaggtccagatacttttggggctggg
agaggttacggaaggggtatgactggaagaatgaatggacgtggttttggaatggaaagg
aaaacacctcctccgggatatgtctgccatcgttgcaatgtccctggacattttattcag
cattgccccactaatggtgaccctaactatgatgttaagagagttaaaccacctaccggt
atccccaagtccatgttgatggcaactccagatggttcttattccttgccaagtggcgca
gttgcagttctgaaaccaaatgaggatgcttttgagaaggaaatggagggattaccatca
acaacacgctctgtaggagaacttccgcctgaattaaaatgcccattatgcaaagaagta
atgagagatgctgcgcttacaagcaaatgttgtttcaagagcttctgtgacaagtgtatc
agagatcacattatttcaaagtcaaggtgtgtttgtggagaaactgatgtccttgctgac
gatcttctaccaaacaagaccctcagggatacgataaaccgtattttggaagctggaaac
gatagcactgagaatgctggcagcgtaggccatatcccaggtccgaaggttctatctcct
actacatctgttgcatctaaaggggagaagaaaccagcacttagtaacaataacgatgct
tcaaccataaagccaccaatggaaactgcagagatcacaagtgcccctcgggcgtctgct
gaagttaatgtggaaaagccagttgatgcatgtgaaagcactcaagggtccgtgattgtg
aaagaagcaactgtttcaaagttgaatacgcaagcccccaaagaagaagtgcagccgcag
gttgctgctggagagccaggaaaaaagaagaaaaagaaacctagagtgcctgggaatgac
atgcaatggaatcctgtgccagatctagcaggccctgactatatgatgcaaatgggacca
gggccgcagtacttcaatggcatgcaaccaggcttcaacggcgtacaaccaggcttcaac
ggcgtacaaccaggcttcaacggtgttcaaccaggcttcaatggctttcaccctggcttc
aatgggtttggagggccttttccaggcgcaatgcctccatttatgggttatggattaaac
ccaatggacatgggatttggtgggggtatgaacatgatgcatccagatccattcatggca
caaggatttggtttccctaatataccaccacctcatagggatctagctgaaatgggaaac
cgcatgaatctccaacgcgccatgatgggcagagatgaagcggaagcccgaaaagctgag
atgttaagaaaacgcgaaaacgagagacgaaccgaaggtgggaagatgtttagggatgga
gaaaatagcagaatgatgatgaacaacaatgggacttcagcctctgcatcatccgtcaac
cctaacaaatctagacaagcacctccgcctccgaatcacgactacgaccgtcggcggaga
ctatccccagagcatccaccaccgcgtaaaatcatctccccgtcgcgcgattccaagaga
aaatctgatcgtcatcccgaagaaagagatgggcaacgcgaccgtgaaaggtctcgtcat
caagacttagaacgtgaacacgaccgcactcgcgaccgtcgcgatgaagaaagaagccgt
caccaccgtggtgattcggaacgcagccagcatcagcaccggaagagatcggaacctcgt
tcatcggagccaccagcgacaaaagcagagatgatgattgataacaatagtcacaagtca
agcgtgttcgctcgtataagctttccggaggaagaaacgtcttccggtaaacgaagaaaa
gtatcatcgtcttcatcggcgtcagtgacggatccgccagcagccgtcgcggtgggaaca
tcggtccaccgacacagcagccggaaggaagtagaagtagcggactatgaatcgagcgac
gaagacaggcatttcaagaggaagccgtcaaggtacgagcggtcaccaccggtggtggtt
gcagatgtgagtgaagataaacaacatcatcatcatcatcatcgatactcctccaaacgt
ggcaagggagagagatcccgaccttag
DBGET
integrated database retrieval system
